Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM11Q96F44 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM11Q96F44 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.83□□□□□ -1.8
TRIM11Q96F44 RNU6-970P-201ENST00000516312 107 ntBASIC3.83□□□□□ -1.8
TRIM11Q96F44 RNA5SP153-201ENST00000516498 76 ntBASIC3.83□□□□□ -1.8
TRIM11Q96F44 RNU7-116P-201ENST00000516940 62 ntBASIC3.83□□□□□ -1.8
TRIM11Q96F44 AC007012.1-201ENST00000567192 175 ntBASIC3.83□□□□□ -1.8
TRIM11Q96F44 MIR5685-201ENST00000579080 79 ntBASIC3.83□□□□□ -1.8
TRIM11Q96F44 AL022345.2-201ENST00000606307 135 ntBASIC3.83□□□□□ -1.8
TRIM11Q96F44 RNVU1-4-201ENST00000612985 164 ntBASIC3.83□□□□□ -1.8
TRIM11Q96F44 AL138880.2-201ENST00000616214 239 ntBASIC3.83□□□□□ -1.8
TRIM11Q96F44 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM11Q96F44 AL159152.1-201ENST00000635019 2587 ntBASIC3.83□□□□□ -1.8
TRIM11Q96F44 AC007256.1-201ENST00000392253 2765 ntBASIC3.83□□□□□ -1.8
TRIM11Q96F44 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM11Q96F44 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM11Q96F44 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM11Q96F44 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM11Q96F44 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
TRIM11Q96F44 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
TRIM11Q96F44 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
TRIM11Q96F44 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM11Q96F44 RNU4-41P-201ENST00000364426 143 ntBASIC3.82□□□□□ -1.8
TRIM11Q96F44 RNA5SP125-201ENST00000364843 120 ntBASIC3.82□□□□□ -1.8
TRIM11Q96F44 SNORA18.2-201ENST00000383865 132 ntBASIC3.82□□□□□ -1.8
TRIM11Q96F44 SNORA51.10-201ENST00000384418 136 ntBASIC3.82□□□□□ -1.8
TRIM11Q96F44 MIR493-201ENST00000385254 89 ntBASIC3.82□□□□□ -1.8
TRIM11Q96F44 RPL23AP82-202ENST00000427528 469 ntBASIC3.82□□□□□ -1.8
TRIM11Q96F44 NDUFB4P6-201ENST00000436819 366 ntBASIC3.82□□□□□ -1.8
TRIM11Q96F44 AL358232.1-201ENST00000448030 501 ntBASIC3.82□□□□□ -1.8
TRIM11Q96F44 RPL23AP7-203ENST00000449021 469 ntBASIC3.82□□□□□ -1.8
TRIM11Q96F44 CENPBD1P1-201ENST00000464061 469 ntBASIC3.82□□□□□ -1.8
TRIM11Q96F44 RPL36AP21-201ENST00000490372 323 ntBASIC3.82□□□□□ -1.8
TRIM11Q96F44 AC026402.1-201ENST00000513642 170 ntBASIC3.82□□□□□ -1.8
TRIM11Q96F44 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.82□□□□□ -1.8
TRIM11Q96F44 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.82□□□□□ -1.8
TRIM11Q96F44 AP003355.3-201ENST00000623465 114 ntBASIC3.82□□□□□ -1.8
TRIM11Q96F44 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM11Q96F44 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM11Q96F44 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM11Q96F44 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.82□□□□□ -1.8
TRIM11Q96F44 AC007496.3-201ENST00000624987 3443 ntBASIC3.82□□□□□ -1.8
TRIM11Q96F44 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM11Q96F44 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TRIM11Q96F44 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM11Q96F44 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM11Q96F44 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM11Q96F44 RNU6-1113P-201ENST00000384348 107 ntBASIC3.81□□□□□ -1.8
TRIM11Q96F44 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM11Q96F44 AL135786.1-201ENST00000415892 214 ntBASIC3.81□□□□□ -1.8
TRIM11Q96F44 AC004975.1-201ENST00000428733 208 ntBASIC3.81□□□□□ -1.8
TRIM11Q96F44 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM11Q96F44 RPL23AP54-201ENST00000495129 419 ntBASIC3.81□□□□□ -1.8
TRIM11Q96F44 RNU6-1337P-201ENST00000516525 95 ntBASIC3.81□□□□□ -1.8
TRIM11Q96F44 RNU2-44P-201ENST00000516795 194 ntBASIC3.81□□□□□ -1.8
TRIM11Q96F44 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.81□□□□□ -1.8
TRIM11Q96F44 AC021739.1-201ENST00000559631 174 ntBASIC3.81□□□□□ -1.8
TRIM11Q96F44 AC105137.2-201ENST00000569073 466 ntBASIC3.81□□□□□ -1.8
TRIM11Q96F44 AC097639.2-201ENST00000603159 172 ntBASIC3.81□□□□□ -1.8
TRIM11Q96F44 AC025521.1-201ENST00000621624 286 ntBASIC3.81□□□□□ -1.8
TRIM11Q96F44 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM11Q96F44 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM11Q96F44 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM11Q96F44 MFSD8-233ENST00000641482 4860 ntBASIC3.81□□□□□ -1.8
TRIM11Q96F44 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM11Q96F44 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.8□□□□□ -1.8
TRIM11Q96F44 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM11Q96F44 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM11Q96F44 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TRIM11Q96F44 Y_RNA.124-201ENST00000363339 93 ntBASIC3.8□□□□□ -1.8
TRIM11Q96F44 Y_RNA.544-201ENST00000384650 113 ntBASIC3.8□□□□□ -1.8
TRIM11Q96F44 MIR548B-201ENST00000385247 97 ntBASIC3.8□□□□□ -1.8
TRIM11Q96F44 SNORA48.8-201ENST00000391324 134 ntBASIC3.8□□□□□ -1.8
TRIM11Q96F44 MIR873-201ENST00000401120 77 ntBASIC3.8□□□□□ -1.8
TRIM11Q96F44 MIR1263-201ENST00000408324 86 ntBASIC3.8□□□□□ -1.8
TRIM11Q96F44 RPS29P7-201ENST00000439662 171 ntBASIC3.8□□□□□ -1.8
TRIM11Q96F44 MTATP6P21-201ENST00000440681 189 ntBASIC3.8□□□□□ -1.8
TRIM11Q96F44 RN7SKP12-201ENST00000516275 143 ntBASIC3.8□□□□□ -1.8
TRIM11Q96F44 RNU1-104P-201ENST00000517280 175 ntBASIC3.8□□□□□ -1.8
TRIM11Q96F44 AC025647.1-201ENST00000517879 253 ntBASIC3.8□□□□□ -1.8
TRIM11Q96F44 IGKV1-22-201ENST00000524313 326 ntBASIC3.8□□□□□ -1.8
TRIM11Q96F44 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM11Q96F44 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM11Q96F44 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM11Q96F44 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
TRIM11Q96F44 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM11Q96F44 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM11Q96F44 Y_RNA.52-201ENST00000362760 96 ntBASIC3.79□□□□□ -1.8
TRIM11Q96F44 DYNLT3P1-201ENST00000378574 347 ntBASIC3.79□□□□□ -1.8
TRIM11Q96F44 SNORD116-13-201ENST00000384408 92 ntBASIC3.79□□□□□ -1.8
TRIM11Q96F44 Y_RNA.528-201ENST00000384575 108 ntBASIC3.79□□□□□ -1.8
TRIM11Q96F44 MIR570-201ENST00000384917 97 ntBASIC3.79□□□□□ -1.8
TRIM11Q96F44 RNU2-70P-201ENST00000410718 179 ntBASIC3.79□□□□□ -1.8
TRIM11Q96F44 AL021397.1-201ENST00000451806 248 ntBASIC3.79□□□□□ -1.8
TRIM11Q96F44 RN7SL594P-201ENST00000470590 287 ntBASIC3.79□□□□□ -1.8
TRIM11Q96F44 PHBP14-201ENST00000512887 367 ntBASIC3.79□□□□□ -1.8
TRIM11Q96F44 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM11Q96F44 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.79□□□□□ -1.8
TRIM11Q96F44 RN7SKP43-201ENST00000516173 320 ntBASIC3.79□□□□□ -1.8
TRIM11Q96F44 RNA5SP281-201ENST00000516504 135 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms