Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 SNORA31.4-201ENST00000516049 129 ntBASIC6.37□□□□□ -1.39
NCBP3Q53F19 RNU6-711P-201ENST00000517255 106 ntBASIC6.37□□□□□ -1.39
NCBP3Q53F19 RNU6-709P-201ENST00000517257 104 ntBASIC6.37□□□□□ -1.39
NCBP3Q53F19 IGKV1-32-201ENST00000519290 311 ntBASIC6.37□□□□□ -1.39
NCBP3Q53F19 MIR4439-201ENST00000583746 80 ntBASIC6.37□□□□□ -1.39
NCBP3Q53F19 MIR4762-201ENST00000585261 75 ntBASIC6.37□□□□□ -1.39
NCBP3Q53F19 AL022401.1-201ENST00000619498 108 ntBASIC6.37□□□□□ -1.39
NCBP3Q53F19 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
NCBP3Q53F19 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
NCBP3Q53F19 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NCBP3Q53F19 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NCBP3Q53F19 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NCBP3Q53F19 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
NCBP3Q53F19 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.36□□□□□ -1.39
NCBP3Q53F19 Y_RNA.332-201ENST00000365271 113 ntBASIC6.36□□□□□ -1.39
NCBP3Q53F19 SNORA27-201ENST00000384323 126 ntBASIC6.36□□□□□ -1.39
NCBP3Q53F19 Y_RNA.625-201ENST00000411256 107 ntBASIC6.36□□□□□ -1.39
NCBP3Q53F19 RPL37P18-201ENST00000411602 243 ntBASIC6.36□□□□□ -1.39
NCBP3Q53F19 AL109933.2-201ENST00000452651 260 ntBASIC6.36□□□□□ -1.39
NCBP3Q53F19 RNA5SP249-201ENST00000516127 99 ntBASIC6.36□□□□□ -1.39
NCBP3Q53F19 RNU6-1041P-201ENST00000516254 102 ntBASIC6.36□□□□□ -1.39
NCBP3Q53F19 CYCSP40-201ENST00000575927 294 ntBASIC6.36□□□□□ -1.39
NCBP3Q53F19 MIR4737-201ENST00000583979 81 ntBASIC6.36□□□□□ -1.39
NCBP3Q53F19 AC087385.3-201ENST00000620477 187 ntBASIC6.36□□□□□ -1.39
NCBP3Q53F19 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NCBP3Q53F19 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
NCBP3Q53F19 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
NCBP3Q53F19 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.35□□□□□ -1.39
NCBP3Q53F19 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
NCBP3Q53F19 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
NCBP3Q53F19 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC6.35□□□□□ -1.39
NCBP3Q53F19 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NCBP3Q53F19 MIR340-201ENST00000362125 95 ntBASIC6.35□□□□□ -1.39
NCBP3Q53F19 Y_RNA.171-201ENST00000363760 102 ntBASIC6.35□□□□□ -1.39
NCBP3Q53F19 Y_RNA.336-201ENST00000365307 109 ntBASIC6.35□□□□□ -1.39
NCBP3Q53F19 RNA5SP87-201ENST00000384155 118 ntBASIC6.35□□□□□ -1.39
NCBP3Q53F19 MIR550A3-201ENST00000390735 95 ntBASIC6.35□□□□□ -1.39
NCBP3Q53F19 U3.30-201ENST00000391308 210 ntBASIC6.35□□□□□ -1.39
NCBP3Q53F19 U3.44-201ENST00000458938 192 ntBASIC6.35□□□□□ -1.39
NCBP3Q53F19 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC6.35□□□□□ -1.39
NCBP3Q53F19 AC022726.1-201ENST00000587475 207 ntBASIC6.35□□□□□ -1.39
NCBP3Q53F19 AL391358.1-201ENST00000605342 190 ntBASIC6.35□□□□□ -1.39
NCBP3Q53F19 AC019206.1-201ENST00000621938 425 ntBASIC6.35□□□□□ -1.39
NCBP3Q53F19 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
NCBP3Q53F19 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NCBP3Q53F19 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC6.35□□□□□ -1.39
NCBP3Q53F19 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
NCBP3Q53F19 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC6.34□□□□□ -1.39
NCBP3Q53F19 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC6.34□□□□□ -1.39
NCBP3Q53F19 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NCBP3Q53F19 NEAT1-202ENST00000501122 22743 ntBASIC6.34□□□□□ -1.39
NCBP3Q53F19 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC6.34□□□□□ -1.39
NCBP3Q53F19 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
NCBP3Q53F19 SNORA80E-201ENST00000384744 137 ntBASIC6.34□□□□□ -1.39
NCBP3Q53F19 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC6.34□□□□□ -1.39
NCBP3Q53F19 RN7SL435P-201ENST00000584418 282 ntBASIC6.34□□□□□ -1.39
NCBP3Q53F19 AC103810.7-201ENST00000607821 91 ntBASIC6.34□□□□□ -1.39
NCBP3Q53F19 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NCBP3Q53F19 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
NCBP3Q53F19 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
NCBP3Q53F19 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
NCBP3Q53F19 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NCBP3Q53F19 AC091152.2-201ENST00000591628 2569 ntBASIC6.33□□□□□ -1.4
NCBP3Q53F19 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC6.33□□□□□ -1.4
NCBP3Q53F19 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
NCBP3Q53F19 AC093831.2-201ENST00000624393 3427 ntBASIC6.33□□□□□ -1.4
NCBP3Q53F19 MAPK10-286ENST00000641208 8747 ntBASIC6.33□□□□□ -1.4
NCBP3Q53F19 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC6.33□□□□□ -1.4
NCBP3Q53F19 U8.5-201ENST00000364528 136 ntBASIC6.33□□□□□ -1.4
NCBP3Q53F19 RNA5SP323-201ENST00000391094 133 ntBASIC6.33□□□□□ -1.4
NCBP3Q53F19 Y_RNA.609-201ENST00000410669 89 ntBASIC6.33□□□□□ -1.4
NCBP3Q53F19 RPL23AP93-201ENST00000440847 484 ntBASIC6.33□□□□□ -1.4
NCBP3Q53F19 snoU13.20-201ENST00000459180 104 ntBASIC6.33□□□□□ -1.4
NCBP3Q53F19 SCARNA3-201ENST00000517097 143 ntBASIC6.33□□□□□ -1.4
NCBP3Q53F19 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NCBP3Q53F19 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NCBP3Q53F19 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC6.32□□□□□ -1.4
NCBP3Q53F19 AC087190.4-201ENST00000574616 8334 ntBASIC6.32□□□□□ -1.4
NCBP3Q53F19 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
NCBP3Q53F19 Y_RNA.241-201ENST00000364470 117 ntBASIC6.32□□□□□ -1.4
NCBP3Q53F19 SNORA1.1-201ENST00000364671 133 ntBASIC6.32□□□□□ -1.4
NCBP3Q53F19 RNU6-1083P-201ENST00000384022 107 ntBASIC6.32□□□□□ -1.4
NCBP3Q53F19 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
NCBP3Q53F19 PTMAP2-201ENST00000397627 327 ntBASIC6.32□□□□□ -1.4
NCBP3Q53F19 COX6B1P1-201ENST00000415962 213 ntBASIC6.32□□□□□ -1.4
NCBP3Q53F19 RNU6-998P-201ENST00000515894 101 ntBASIC6.32□□□□□ -1.4
NCBP3Q53F19 RNU1-6P-201ENST00000516290 144 ntBASIC6.32□□□□□ -1.4
NCBP3Q53F19 MIR4712-201ENST00000583750 82 ntBASIC6.32□□□□□ -1.4
NCBP3Q53F19 AC091979.2-201ENST00000607514 214 ntBASIC6.32□□□□□ -1.4
NCBP3Q53F19 MIR376B-201ENST00000614515 100 ntBASIC6.32□□□□□ -1.4
NCBP3Q53F19 CR392039.5-201ENST00000623201 510 ntBASIC6.32□□□□□ -1.4
NCBP3Q53F19 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
NCBP3Q53F19 AL161912.2-201ENST00000565707 3007 ntBASIC6.32□□□□□ -1.4
NCBP3Q53F19 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC6.32□□□□□ -1.4
NCBP3Q53F19 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NCBP3Q53F19 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
NCBP3Q53F19 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
NCBP3Q53F19 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.31□□□□□ -1.4
NCBP3Q53F19 AC096644.4-201ENST00000563417 2912 ntBASIC6.31□□□□□ -1.4
NCBP3Q53F19 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms