Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 RNU6-770P-201ENST00000363929 105 ntBASIC2.85□□□□□ -1.95
MKS1Q9NXB0 RNA5SP72-201ENST00000364442 117 ntBASIC2.85□□□□□ -1.95
MKS1Q9NXB0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
MKS1Q9NXB0 RNU6-1072P-201ENST00000384703 107 ntBASIC2.85□□□□□ -1.95
MKS1Q9NXB0 RNU6-443P-201ENST00000384780 107 ntBASIC2.85□□□□□ -1.95
MKS1Q9NXB0 MIR592-201ENST00000384959 97 ntBASIC2.85□□□□□ -1.95
MKS1Q9NXB0 RNA5SP171-201ENST00000391071 115 ntBASIC2.85□□□□□ -1.95
MKS1Q9NXB0 MIR1283-1-201ENST00000408494 87 ntBASIC2.85□□□□□ -1.95
MKS1Q9NXB0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.85□□□□□ -1.95
MKS1Q9NXB0 AC005326.1-201ENST00000429197 123 ntBASIC2.85□□□□□ -1.95
MKS1Q9NXB0 PRSS3P4-201ENST00000453323 162 ntBASIC2.85□□□□□ -1.95
MKS1Q9NXB0 AC003982.1-202ENST00000469928 248 ntBASIC2.85□□□□□ -1.95
MKS1Q9NXB0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.85□□□□□ -1.95
MKS1Q9NXB0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.85□□□□□ -1.95
MKS1Q9NXB0 RNY3P15-201ENST00000516297 97 ntBASIC2.85□□□□□ -1.95
MKS1Q9NXB0 RNA5SP490-201ENST00000517141 136 ntBASIC2.85□□□□□ -1.95
MKS1Q9NXB0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.85□□□□□ -1.95
MKS1Q9NXB0 PRELID2P1-201ENST00000552837 301 ntBASIC2.85□□□□□ -1.95
MKS1Q9NXB0 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.85□□□□□ -1.95
MKS1Q9NXB0 MIR5680-201ENST00000577577 84 ntBASIC2.85□□□□□ -1.95
MKS1Q9NXB0 MIR7975-201ENST00000619350 68 ntBASIC2.85□□□□□ -1.95
MKS1Q9NXB0 AC130454.1-201ENST00000622948 401 ntBASIC2.85□□□□□ -1.95
MKS1Q9NXB0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
MKS1Q9NXB0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.85□□□□□ -1.95
MKS1Q9NXB0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
MKS1Q9NXB0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
MKS1Q9NXB0 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
MKS1Q9NXB0 RNU6-626P-201ENST00000363354 107 ntBASIC2.84□□□□□ -1.95
MKS1Q9NXB0 Y_RNA.149-201ENST00000363558 117 ntBASIC2.84□□□□□ -1.95
MKS1Q9NXB0 U3.8-201ENST00000363675 217 ntBASIC2.84□□□□□ -1.95
MKS1Q9NXB0 SNORA67.1-201ENST00000364749 141 ntBASIC2.84□□□□□ -1.95
MKS1Q9NXB0 Y_RNA.574-201ENST00000384766 95 ntBASIC2.84□□□□□ -1.95
MKS1Q9NXB0 AC007064.1-201ENST00000412238 351 ntBASIC2.84□□□□□ -1.95
MKS1Q9NXB0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.84□□□□□ -1.95
MKS1Q9NXB0 NDUFB4P10-201ENST00000452541 359 ntBASIC2.84□□□□□ -1.95
MKS1Q9NXB0 HMGN2P9-201ENST00000476875 229 ntBASIC2.84□□□□□ -1.95
MKS1Q9NXB0 MTCO2P24-201ENST00000515611 426 ntBASIC2.84□□□□□ -1.95
MKS1Q9NXB0 RNU6-1143P-201ENST00000516125 104 ntBASIC2.84□□□□□ -1.95
MKS1Q9NXB0 AC136932.1-201ENST00000574771 208 ntBASIC2.84□□□□□ -1.95
MKS1Q9NXB0 MIR5004-201ENST00000579078 107 ntBASIC2.84□□□□□ -1.95
MKS1Q9NXB0 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.84□□□□□ -1.95
MKS1Q9NXB0 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.84□□□□□ -1.95
MKS1Q9NXB0 MIR3651-201ENST00000630427 90 ntBASIC2.84□□□□□ -1.95
MKS1Q9NXB0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
MKS1Q9NXB0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.83□□□□□ -1.96
MKS1Q9NXB0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
MKS1Q9NXB0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
MKS1Q9NXB0 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.83□□□□□ -1.96
MKS1Q9NXB0 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
MKS1Q9NXB0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
MKS1Q9NXB0 MIR26A1-201ENST00000362205 77 ntBASIC2.83□□□□□ -1.96
MKS1Q9NXB0 Y_RNA.19-201ENST00000362462 99 ntBASIC2.83□□□□□ -1.96
MKS1Q9NXB0 Y_RNA.47-201ENST00000362697 108 ntBASIC2.83□□□□□ -1.96
MKS1Q9NXB0 RNU6-238P-201ENST00000363313 106 ntBASIC2.83□□□□□ -1.96
MKS1Q9NXB0 RNU6-438P-201ENST00000365561 103 ntBASIC2.83□□□□□ -1.96
MKS1Q9NXB0 RNU6-20P-201ENST00000384106 107 ntBASIC2.83□□□□□ -1.96
MKS1Q9NXB0 SNORA48.5-201ENST00000391143 135 ntBASIC2.83□□□□□ -1.96
MKS1Q9NXB0 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
MKS1Q9NXB0 RAB28P5-201ENST00000427490 651 ntBASIC2.83□□□□□ -1.96
MKS1Q9NXB0 MTCYBP9-201ENST00000431021 303 ntBASIC2.83□□□□□ -1.96
MKS1Q9NXB0 AC005002.2-201ENST00000438228 269 ntBASIC2.83□□□□□ -1.96
MKS1Q9NXB0 AC006028.1-201ENST00000438379 402 ntBASIC2.83□□□□□ -1.96
MKS1Q9NXB0 AL731563.1-201ENST00000442202 214 ntBASIC2.83□□□□□ -1.96
MKS1Q9NXB0 DYNLT3P2-201ENST00000442517 295 ntBASIC2.83□□□□□ -1.96
MKS1Q9NXB0 AC011753.1-201ENST00000451001 220 ntBASIC2.83□□□□□ -1.96
MKS1Q9NXB0 AC016925.1-201ENST00000458303 298 ntBASIC2.83□□□□□ -1.96
MKS1Q9NXB0 RNA5SP367-201ENST00000516557 118 ntBASIC2.83□□□□□ -1.96
MKS1Q9NXB0 RNU6-107P-201ENST00000516643 102 ntBASIC2.83□□□□□ -1.96
MKS1Q9NXB0 NDUFA5P6-201ENST00000542110 379 ntBASIC2.83□□□□□ -1.96
MKS1Q9NXB0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.83□□□□□ -1.96
MKS1Q9NXB0 MIR4753-201ENST00000585119 83 ntBASIC2.83□□□□□ -1.96
MKS1Q9NXB0 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.83□□□□□ -1.96
MKS1Q9NXB0 LINC02555-201ENST00000563933 1951 ntBASIC2.83□□□□□ -1.96
MKS1Q9NXB0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.83□□□□□ -1.96
MKS1Q9NXB0 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
MKS1Q9NXB0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
MKS1Q9NXB0 AC092593.1-201ENST00000515413 1815 ntBASIC2.82□□□□□ -1.96
MKS1Q9NXB0 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
MKS1Q9NXB0 MIR410-201ENST00000362222 80 ntBASIC2.82□□□□□ -1.96
MKS1Q9NXB0 Y_RNA.105-201ENST00000363182 111 ntBASIC2.82□□□□□ -1.96
MKS1Q9NXB0 RNU6-806P-201ENST00000365147 105 ntBASIC2.82□□□□□ -1.96
MKS1Q9NXB0 RNU6-1264P-201ENST00000383891 107 ntBASIC2.82□□□□□ -1.96
MKS1Q9NXB0 Y_RNA.462-201ENST00000384268 102 ntBASIC2.82□□□□□ -1.96
MKS1Q9NXB0 MIR548B-201ENST00000385247 97 ntBASIC2.82□□□□□ -1.96
MKS1Q9NXB0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
MKS1Q9NXB0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.82□□□□□ -1.96
MKS1Q9NXB0 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.82□□□□□ -1.96
MKS1Q9NXB0 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.82□□□□□ -1.96
MKS1Q9NXB0 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.82□□□□□ -1.96
MKS1Q9NXB0 LINC01399-202ENST00000458450 244 ntBASIC2.82□□□□□ -1.96
MKS1Q9NXB0 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.82□□□□□ -1.96
MKS1Q9NXB0 AC025465.3-201ENST00000510570 311 ntBASIC2.82□□□□□ -1.96
MKS1Q9NXB0 RNU6-991P-201ENST00000516168 107 ntBASIC2.82□□□□□ -1.96
MKS1Q9NXB0 MIR4423-201ENST00000580922 80 ntBASIC2.82□□□□□ -1.96
MKS1Q9NXB0 MIR3944-201ENST00000581277 108 ntBASIC2.82□□□□□ -1.96
MKS1Q9NXB0 MIR5194-201ENST00000582634 120 ntBASIC2.82□□□□□ -1.96
MKS1Q9NXB0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.82□□□□□ -1.96
MKS1Q9NXB0 MIR7112-201ENST00000616126 65 ntBASIC2.82□□□□□ -1.96
MKS1Q9NXB0 MIR376A1-201ENST00000616574 68 ntBASIC2.82□□□□□ -1.96
MKS1Q9NXB0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms