Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NUBP1P53384 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.83□□□□□ -1.64
NUBP1P53384 Y_RNA.4-201ENST00000362333 112 ntBASIC4.83□□□□□ -1.64
NUBP1P53384 SNORA71.2-201ENST00000364941 134 ntBASIC4.83□□□□□ -1.64
NUBP1P53384 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NUBP1P53384 MIR515-2-201ENST00000384883 83 ntBASIC4.83□□□□□ -1.64
NUBP1P53384 MIR515-1-201ENST00000384884 83 ntBASIC4.83□□□□□ -1.64
NUBP1P53384 RNU6-628P-201ENST00000410675 107 ntBASIC4.83□□□□□ -1.64
NUBP1P53384 AL109933.2-201ENST00000452651 260 ntBASIC4.83□□□□□ -1.64
NUBP1P53384 RNU7-96P-201ENST00000459535 64 ntBASIC4.83□□□□□ -1.64
NUBP1P53384 RN7SL814P-201ENST00000487715 300 ntBASIC4.83□□□□□ -1.64
NUBP1P53384 CKS1BP2-201ENST00000497342 240 ntBASIC4.83□□□□□ -1.64
NUBP1P53384 SCARNA3-201ENST00000517097 143 ntBASIC4.83□□□□□ -1.64
NUBP1P53384 MIR5739-201ENST00000619803 80 ntBASIC4.83□□□□□ -1.64
NUBP1P53384 AC007546.2-201ENST00000623996 360 ntBASIC4.83□□□□□ -1.64
NUBP1P53384 MIR338-201ENST00000636369 67 ntBASIC4.83□□□□□ -1.64
NUBP1P53384 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
NUBP1P53384 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.83□□□□□ -1.64
NUBP1P53384 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.83□□□□□ -1.64
NUBP1P53384 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NUBP1P53384 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.83□□□□□ -1.64
NUBP1P53384 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.82□□□□□ -1.64
NUBP1P53384 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.82□□□□□ -1.64
NUBP1P53384 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
NUBP1P53384 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NUBP1P53384 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NUBP1P53384 SNORD38C-201ENST00000384381 69 ntBASIC4.82□□□□□ -1.64
NUBP1P53384 RNU1-13P-201ENST00000384499 162 ntBASIC4.82□□□□□ -1.64
NUBP1P53384 SNORA8-201ENST00000384574 139 ntBASIC4.82□□□□□ -1.64
NUBP1P53384 PTMAP2-201ENST00000397627 327 ntBASIC4.82□□□□□ -1.64
NUBP1P53384 AL353813.1-201ENST00000440700 253 ntBASIC4.82□□□□□ -1.64
NUBP1P53384 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.82□□□□□ -1.64
NUBP1P53384 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.82□□□□□ -1.64
NUBP1P53384 RNU6-1041P-201ENST00000516254 102 ntBASIC4.82□□□□□ -1.64
NUBP1P53384 AC023632.4-201ENST00000517783 191 ntBASIC4.82□□□□□ -1.64
NUBP1P53384 AL512310.12-203ENST00000640543 90 ntBASIC4.82□□□□□ -1.64
NUBP1P53384 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.82□□□□□ -1.64
NUBP1P53384 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
NUBP1P53384 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
NUBP1P53384 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NUBP1P53384 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
NUBP1P53384 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
NUBP1P53384 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.82□□□□□ -1.64
NUBP1P53384 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NUBP1P53384 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.82□□□□□ -1.64
NUBP1P53384 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
NUBP1P53384 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
NUBP1P53384 AL022322.2-201ENST00000624072 20397 ntBASIC4.82□□□□□ -1.64
NUBP1P53384 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NUBP1P53384 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NUBP1P53384 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
NUBP1P53384 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.81□□□□□ -1.64
NUBP1P53384 SNORD46.1-201ENST00000364139 104 ntBASIC4.81□□□□□ -1.64
NUBP1P53384 SNORD58A-201ENST00000383875 65 ntBASIC4.81□□□□□ -1.64
NUBP1P53384 SNORA70.10-201ENST00000384515 134 ntBASIC4.81□□□□□ -1.64
NUBP1P53384 SNORA48.4-201ENST00000391089 134 ntBASIC4.81□□□□□ -1.64
NUBP1P53384 AC011998.1-201ENST00000433403 117 ntBASIC4.81□□□□□ -1.64
NUBP1P53384 RNU7-113P-201ENST00000459273 62 ntBASIC4.81□□□□□ -1.64
NUBP1P53384 RN7SL271P-201ENST00000487601 295 ntBASIC4.81□□□□□ -1.64
NUBP1P53384 RNA5SP392-201ENST00000516905 112 ntBASIC4.81□□□□□ -1.64
NUBP1P53384 AL121932.1-201ENST00000605542 214 ntBASIC4.81□□□□□ -1.64
NUBP1P53384 AL353149.1-201ENST00000610667 244 ntBASIC4.81□□□□□ -1.64
NUBP1P53384 MIR3653-201ENST00000625572 110 ntBASIC4.81□□□□□ -1.64
NUBP1P53384 U6.108-201ENST00000637764 58 ntBASIC4.81□□□□□ -1.64
NUBP1P53384 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NUBP1P53384 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NUBP1P53384 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
NUBP1P53384 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NUBP1P53384 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NUBP1P53384 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NUBP1P53384 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NUBP1P53384 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NUBP1P53384 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.8□□□□□ -1.64
NUBP1P53384 Y_RNA.241-201ENST00000364470 117 ntBASIC4.8□□□□□ -1.64
NUBP1P53384 RNA5SP366-201ENST00000365454 123 ntBASIC4.8□□□□□ -1.64
NUBP1P53384 Y_RNA.430-201ENST00000384081 110 ntBASIC4.8□□□□□ -1.64
NUBP1P53384 CYP2C59P-201ENST00000457790 269 ntBASIC4.8□□□□□ -1.64
NUBP1P53384 AC026726.1-201ENST00000512859 601 ntBASIC4.8□□□□□ -1.64
NUBP1P53384 RNU6-998P-201ENST00000515894 101 ntBASIC4.8□□□□□ -1.64
NUBP1P53384 SCARNA11.3-201ENST00000517276 130 ntBASIC4.8□□□□□ -1.64
NUBP1P53384 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC4.8□□□□□ -1.64
NUBP1P53384 MIR5699-201ENST00000578903 90 ntBASIC4.8□□□□□ -1.64
NUBP1P53384 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.8□□□□□ -1.64
NUBP1P53384 MIR7853-201ENST00000584820 132 ntBASIC4.8□□□□□ -1.64
NUBP1P53384 MIR548BB-201ENST00000626714 66 ntBASIC4.8□□□□□ -1.64
NUBP1P53384 CTSLP2-204ENST00000629029 392 ntBASIC4.8□□□□□ -1.64
NUBP1P53384 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NUBP1P53384 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
NUBP1P53384 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
NUBP1P53384 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NUBP1P53384 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
NUBP1P53384 AC005005.4-201ENST00000623789 16698 ntBASIC4.79□□□□□ -1.64
NUBP1P53384 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.79□□□□□ -1.64
NUBP1P53384 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.79□□□□□ -1.64
NUBP1P53384 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.79□□□□□ -1.64
NUBP1P53384 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NUBP1P53384 MIR340-201ENST00000362125 95 ntBASIC4.79□□□□□ -1.64
NUBP1P53384 RNU6-509P-201ENST00000363519 107 ntBASIC4.79□□□□□ -1.64
NUBP1P53384 RNA5SP482-201ENST00000391269 118 ntBASIC4.79□□□□□ -1.64
NUBP1P53384 RNA5SP317-201ENST00000410176 116 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms