Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SYNPOQ8N3V7 RPL17P51-201ENST00000605218 238 ntBASIC3.19□□□□□ -1.9
SYNPOQ8N3V7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SYNPOQ8N3V7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.19□□□□□ -1.9
SYNPOQ8N3V7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SYNPOQ8N3V7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.19□□□□□ -1.9
SYNPOQ8N3V7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.18□□□□□ -1.9
SYNPOQ8N3V7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SYNPOQ8N3V7 RNU6-545P-201ENST00000362681 104 ntBASIC3.18□□□□□ -1.9
SYNPOQ8N3V7 RNU6-805P-201ENST00000365643 106 ntBASIC3.18□□□□□ -1.9
SYNPOQ8N3V7 Y_RNA.574-201ENST00000384766 95 ntBASIC3.18□□□□□ -1.9
SYNPOQ8N3V7 MIR561-201ENST00000385216 97 ntBASIC3.18□□□□□ -1.9
SYNPOQ8N3V7 RNA5SP293-201ENST00000410527 113 ntBASIC3.18□□□□□ -1.9
SYNPOQ8N3V7 ELOCP20-201ENST00000422460 345 ntBASIC3.18□□□□□ -1.9
SYNPOQ8N3V7 ARL5AP4-201ENST00000430731 512 ntBASIC3.18□□□□□ -1.9
SYNPOQ8N3V7 AC108059.2-201ENST00000434626 151 ntBASIC3.18□□□□□ -1.9
SYNPOQ8N3V7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.18□□□□□ -1.9
SYNPOQ8N3V7 SNORA64.4-201ENST00000516632 81 ntBASIC3.18□□□□□ -1.9
SYNPOQ8N3V7 AC022616.8-201ENST00000533569 253 ntBASIC3.18□□□□□ -1.9
SYNPOQ8N3V7 U4.1-201ENST00000620349 87 ntBASIC3.18□□□□□ -1.9
SYNPOQ8N3V7 AC130454.1-201ENST00000622948 401 ntBASIC3.18□□□□□ -1.9
SYNPOQ8N3V7 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.18□□□□□ -1.9
SYNPOQ8N3V7 FAM35CP-201ENST00000554755 2470 ntBASIC3.18□□□□□ -1.9
SYNPOQ8N3V7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SYNPOQ8N3V7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SYNPOQ8N3V7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.17□□□□□ -1.9
SYNPOQ8N3V7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.17□□□□□ -1.9
SYNPOQ8N3V7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SYNPOQ8N3V7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SYNPOQ8N3V7 Y_RNA.64-201ENST00000362845 102 ntBASIC3.17□□□□□ -1.9
SYNPOQ8N3V7 Y_RNA.214-201ENST00000364201 112 ntBASIC3.17□□□□□ -1.9
SYNPOQ8N3V7 SNORA72.2-201ENST00000365028 127 ntBASIC3.17□□□□□ -1.9
SYNPOQ8N3V7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.17□□□□□ -1.9
SYNPOQ8N3V7 MIR1302-3-201ENST00000408128 138 ntBASIC3.17□□□□□ -1.9
SYNPOQ8N3V7 EEF1A1P41-201ENST00000414667 207 ntBASIC3.17□□□□□ -1.9
SYNPOQ8N3V7 AC003685.2-201ENST00000422795 395 ntBASIC3.17□□□□□ -1.9
SYNPOQ8N3V7 CST9LP2-201ENST00000437612 320 ntBASIC3.17□□□□□ -1.9
SYNPOQ8N3V7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.17□□□□□ -1.9
SYNPOQ8N3V7 AC073910.1-201ENST00000445047 438 ntBASIC3.17□□□□□ -1.9
SYNPOQ8N3V7 RNU6-344P-201ENST00000516635 111 ntBASIC3.17□□□□□ -1.9
SYNPOQ8N3V7 SNORA48.11-201ENST00000517015 89 ntBASIC3.17□□□□□ -1.9
SYNPOQ8N3V7 CYCSP23-201ENST00000519781 313 ntBASIC3.17□□□□□ -1.9
SYNPOQ8N3V7 AC018448.1-201ENST00000552843 316 ntBASIC3.17□□□□□ -1.9
SYNPOQ8N3V7 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
SYNPOQ8N3V7 AC110588.1-201ENST00000559699 137 ntBASIC3.17□□□□□ -1.9
SYNPOQ8N3V7 PRR13P7-201ENST00000605538 430 ntBASIC3.17□□□□□ -1.9
SYNPOQ8N3V7 AL449363.1-201ENST00000617815 186 ntBASIC3.17□□□□□ -1.9
SYNPOQ8N3V7 AC073476.4-201ENST00000628409 72 ntBASIC3.17□□□□□ -1.9
SYNPOQ8N3V7 MIR1248-201ENST00000629190 106 ntBASIC3.17□□□□□ -1.9
SYNPOQ8N3V7 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.17□□□□□ -1.9
SYNPOQ8N3V7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.16□□□□□ -1.9
SYNPOQ8N3V7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SYNPOQ8N3V7 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SYNPOQ8N3V7 RNA5SP383-201ENST00000362934 120 ntBASIC3.16□□□□□ -1.9
SYNPOQ8N3V7 SNORD56.3-201ENST00000363507 71 ntBASIC3.16□□□□□ -1.9
SYNPOQ8N3V7 Y_RNA.183-201ENST00000363882 113 ntBASIC3.16□□□□□ -1.9
SYNPOQ8N3V7 RNU6-961P-201ENST00000363893 105 ntBASIC3.16□□□□□ -1.9
SYNPOQ8N3V7 RNU6-770P-201ENST00000363929 105 ntBASIC3.16□□□□□ -1.9
SYNPOQ8N3V7 RNU6-301P-201ENST00000384277 107 ntBASIC3.16□□□□□ -1.9
SYNPOQ8N3V7 RNU6-937P-201ENST00000384325 106 ntBASIC3.16□□□□□ -1.9
SYNPOQ8N3V7 RNU6-851P-201ENST00000384565 107 ntBASIC3.16□□□□□ -1.9
SYNPOQ8N3V7 RNU6-1109P-201ENST00000391187 107 ntBASIC3.16□□□□□ -1.9
SYNPOQ8N3V7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.16□□□□□ -1.9
SYNPOQ8N3V7 AC022018.1-201ENST00000430685 241 ntBASIC3.16□□□□□ -1.9
SYNPOQ8N3V7 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.16□□□□□ -1.9
SYNPOQ8N3V7 RNU7-26P-201ENST00000458980 63 ntBASIC3.16□□□□□ -1.9
SYNPOQ8N3V7 RNA5SP356-201ENST00000515972 94 ntBASIC3.16□□□□□ -1.9
SYNPOQ8N3V7 RNA5SP490-201ENST00000517141 136 ntBASIC3.16□□□□□ -1.9
SYNPOQ8N3V7 AC109329.2-201ENST00000519658 482 ntBASIC3.16□□□□□ -1.9
SYNPOQ8N3V7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.16□□□□□ -1.9
SYNPOQ8N3V7 AL161670.1-201ENST00000554348 137 ntBASIC3.16□□□□□ -1.9
SYNPOQ8N3V7 MIR4753-201ENST00000585119 83 ntBASIC3.16□□□□□ -1.9
SYNPOQ8N3V7 AC025754.2-201ENST00000606491 432 ntBASIC3.16□□□□□ -1.9
SYNPOQ8N3V7 MIR376A1-201ENST00000616574 68 ntBASIC3.16□□□□□ -1.9
SYNPOQ8N3V7 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SYNPOQ8N3V7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SYNPOQ8N3V7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.15□□□□□ -1.9
SYNPOQ8N3V7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.15□□□□□ -1.91
SYNPOQ8N3V7 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.15□□□□□ -1.91
SYNPOQ8N3V7 MIR22-201ENST00000362190 85 ntBASIC3.15□□□□□ -1.91
SYNPOQ8N3V7 RNU6-626P-201ENST00000363354 107 ntBASIC3.15□□□□□ -1.91
SYNPOQ8N3V7 RNU6-702P-201ENST00000364982 107 ntBASIC3.15□□□□□ -1.91
SYNPOQ8N3V7 RNU6-806P-201ENST00000365147 105 ntBASIC3.15□□□□□ -1.91
SYNPOQ8N3V7 SNORA54-201ENST00000384281 123 ntBASIC3.15□□□□□ -1.91
SYNPOQ8N3V7 MT-TG-201ENST00000387429 68 ntBASIC3.15□□□□□ -1.91
SYNPOQ8N3V7 MRPL35P1-201ENST00000404272 572 ntBASIC3.15□□□□□ -1.91
SYNPOQ8N3V7 Z82209.1-201ENST00000422141 2135 ntBASIC3.15□□□□□ -1.91
SYNPOQ8N3V7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.15□□□□□ -1.91
SYNPOQ8N3V7 AC009969.1-201ENST00000438726 172 ntBASIC3.15□□□□□ -1.91
SYNPOQ8N3V7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.15□□□□□ -1.91
SYNPOQ8N3V7 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.15□□□□□ -1.91
SYNPOQ8N3V7 RNA5SP367-201ENST00000516557 118 ntBASIC3.15□□□□□ -1.91
SYNPOQ8N3V7 SCARNA20.6-201ENST00000517251 106 ntBASIC3.15□□□□□ -1.91
SYNPOQ8N3V7 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.15□□□□□ -1.91
SYNPOQ8N3V7 AC018630.3-201ENST00000542637 96 ntBASIC3.15□□□□□ -1.91
SYNPOQ8N3V7 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
SYNPOQ8N3V7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.15□□□□□ -1.91
SYNPOQ8N3V7 AC068205.3-201ENST00000636385 468 ntBASIC3.15□□□□□ -1.91
SYNPOQ8N3V7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.14□□□□□ -1.91
SYNPOQ8N3V7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms