Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RNU6-628P-201ENST00000410675 107 ntBASIC4.72□□□□□ -1.65
VARS2Q5ST30 Z74021.1-201ENST00000423610 407 ntBASIC4.72□□□□□ -1.65
VARS2Q5ST30 RPL30P4-201ENST00000429309 333 ntBASIC4.72□□□□□ -1.65
VARS2Q5ST30 RPS26P2-201ENST00000440331 348 ntBASIC4.72□□□□□ -1.65
VARS2Q5ST30 RNA5SP497-201ENST00000516081 97 ntBASIC4.72□□□□□ -1.65
VARS2Q5ST30 AC091178.1-203ENST00000584586 279 ntBASIC4.72□□□□□ -1.65
VARS2Q5ST30 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
VARS2Q5ST30 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.72□□□□□ -1.65
VARS2Q5ST30 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VARS2Q5ST30 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.72□□□□□ -1.65
VARS2Q5ST30 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
VARS2Q5ST30 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VARS2Q5ST30 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.71□□□□□ -1.66
VARS2Q5ST30 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
VARS2Q5ST30 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
VARS2Q5ST30 RNU1-22P-201ENST00000363334 158 ntBASIC4.71□□□□□ -1.66
VARS2Q5ST30 RNA5SP366-201ENST00000365454 123 ntBASIC4.71□□□□□ -1.66
VARS2Q5ST30 RNU6-1201P-201ENST00000384227 107 ntBASIC4.71□□□□□ -1.66
VARS2Q5ST30 snoU13.4-201ENST00000458916 104 ntBASIC4.71□□□□□ -1.66
VARS2Q5ST30 RPS23P4-201ENST00000487908 423 ntBASIC4.71□□□□□ -1.66
VARS2Q5ST30 RN7SKP46-201ENST00000515942 234 ntBASIC4.71□□□□□ -1.66
VARS2Q5ST30 RNU6-1098P-201ENST00000516772 96 ntBASIC4.71□□□□□ -1.66
VARS2Q5ST30 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.71□□□□□ -1.66
VARS2Q5ST30 AC026241.1-201ENST00000517873 2142 ntBASIC4.71□□□□□ -1.66
VARS2Q5ST30 TRAV8-5-201ENST00000537369 341 ntBASIC4.71□□□□□ -1.66
VARS2Q5ST30 AC079587.1-201ENST00000603846 277 ntBASIC4.71□□□□□ -1.66
VARS2Q5ST30 AC069200.1-201ENST00000609511 323 ntBASIC4.71□□□□□ -1.66
VARS2Q5ST30 AC006065.5-201ENST00000623427 349 ntBASIC4.71□□□□□ -1.66
VARS2Q5ST30 MIR3653-201ENST00000625572 110 ntBASIC4.71□□□□□ -1.66
VARS2Q5ST30 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VARS2Q5ST30 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VARS2Q5ST30 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VARS2Q5ST30 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
VARS2Q5ST30 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VARS2Q5ST30 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.71□□□□□ -1.66
VARS2Q5ST30 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.7□□□□□ -1.66
VARS2Q5ST30 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
VARS2Q5ST30 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VARS2Q5ST30 RNU1-132P-201ENST00000364300 164 ntBASIC4.7□□□□□ -1.66
VARS2Q5ST30 SNORA14A-201ENST00000364773 135 ntBASIC4.7□□□□□ -1.66
VARS2Q5ST30 RNU6-524P-201ENST00000384270 107 ntBASIC4.7□□□□□ -1.66
VARS2Q5ST30 RNU1-13P-201ENST00000384499 162 ntBASIC4.7□□□□□ -1.66
VARS2Q5ST30 MIR300-201ENST00000401138 83 ntBASIC4.7□□□□□ -1.66
VARS2Q5ST30 AL133475.1-201ENST00000404414 305 ntBASIC4.7□□□□□ -1.66
VARS2Q5ST30 RNU6-57P-201ENST00000411348 103 ntBASIC4.7□□□□□ -1.66
VARS2Q5ST30 RN7SL542P-201ENST00000467147 294 ntBASIC4.7□□□□□ -1.66
VARS2Q5ST30 RPS27P22-201ENST00000478056 241 ntBASIC4.7□□□□□ -1.66
VARS2Q5ST30 AC093259.1-201ENST00000509755 300 ntBASIC4.7□□□□□ -1.66
VARS2Q5ST30 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.7□□□□□ -1.66
VARS2Q5ST30 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.7□□□□□ -1.66
VARS2Q5ST30 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.7□□□□□ -1.66
VARS2Q5ST30 AC140479.6-201ENST00000633535 357 ntBASIC4.7□□□□□ -1.66
VARS2Q5ST30 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VARS2Q5ST30 AP001273.1-201ENST00000624493 3152 ntBASIC4.7□□□□□ -1.66
VARS2Q5ST30 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VARS2Q5ST30 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VARS2Q5ST30 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VARS2Q5ST30 AL672167.1-203ENST00000641299 2975 ntBASIC4.69□□□□□ -1.66
VARS2Q5ST30 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VARS2Q5ST30 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VARS2Q5ST30 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
VARS2Q5ST30 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VARS2Q5ST30 MIR208A-201ENST00000362287 71 ntBASIC4.69□□□□□ -1.66
VARS2Q5ST30 RNU6-315P-201ENST00000362666 107 ntBASIC4.69□□□□□ -1.66
VARS2Q5ST30 RNU6-457P-201ENST00000363999 107 ntBASIC4.69□□□□□ -1.66
VARS2Q5ST30 RNU6-335P-201ENST00000364563 113 ntBASIC4.69□□□□□ -1.66
VARS2Q5ST30 Y_RNA.333-201ENST00000365274 102 ntBASIC4.69□□□□□ -1.66
VARS2Q5ST30 RNA5SP372-201ENST00000390836 115 ntBASIC4.69□□□□□ -1.66
VARS2Q5ST30 MIR921-201ENST00000401133 56 ntBASIC4.69□□□□□ -1.66
VARS2Q5ST30 MTND4LP19-201ENST00000403051 166 ntBASIC4.69□□□□□ -1.66
VARS2Q5ST30 RNA5SP317-201ENST00000410176 116 ntBASIC4.69□□□□□ -1.66
VARS2Q5ST30 RNA5SP311-201ENST00000411290 116 ntBASIC4.69□□□□□ -1.66
VARS2Q5ST30 AL513477.1-202ENST00000417061 214 ntBASIC4.69□□□□□ -1.66
VARS2Q5ST30 TOMM22P1-201ENST00000418578 312 ntBASIC4.69□□□□□ -1.66
VARS2Q5ST30 AP001486.1-201ENST00000463339 476 ntBASIC4.69□□□□□ -1.66
VARS2Q5ST30 RN7SL271P-201ENST00000487601 295 ntBASIC4.69□□□□□ -1.66
VARS2Q5ST30 PARP4P3-201ENST00000510265 317 ntBASIC4.69□□□□□ -1.66
VARS2Q5ST30 RNA5SP315-201ENST00000516340 116 ntBASIC4.69□□□□□ -1.66
VARS2Q5ST30 RNA5SP312-201ENST00000517068 116 ntBASIC4.69□□□□□ -1.66
VARS2Q5ST30 RNU6-1231P-201ENST00000517185 103 ntBASIC4.69□□□□□ -1.66
VARS2Q5ST30 AC022217.4-201ENST00000604389 163 ntBASIC4.69□□□□□ -1.66
VARS2Q5ST30 RNU6-91P-201ENST00000607774 107 ntBASIC4.69□□□□□ -1.66
VARS2Q5ST30 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VARS2Q5ST30 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VARS2Q5ST30 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VARS2Q5ST30 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VARS2Q5ST30 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.68□□□□□ -1.66
VARS2Q5ST30 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
VARS2Q5ST30 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.68□□□□□ -1.66
VARS2Q5ST30 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
VARS2Q5ST30 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.68□□□□□ -1.66
VARS2Q5ST30 RNU6-743P-201ENST00000364151 106 ntBASIC4.68□□□□□ -1.66
VARS2Q5ST30 SNORD115-27-201ENST00000364430 82 ntBASIC4.68□□□□□ -1.66
VARS2Q5ST30 Y_RNA.242-201ENST00000364473 110 ntBASIC4.68□□□□□ -1.66
VARS2Q5ST30 RNU1-63P-201ENST00000383902 164 ntBASIC4.68□□□□□ -1.66
VARS2Q5ST30 RNU6-975P-201ENST00000384296 105 ntBASIC4.68□□□□□ -1.66
VARS2Q5ST30 RNU6-178P-201ENST00000384631 104 ntBASIC4.68□□□□□ -1.66
VARS2Q5ST30 SNORA7.5-201ENST00000410672 110 ntBASIC4.68□□□□□ -1.66
VARS2Q5ST30 RPL23AP83-201ENST00000434984 473 ntBASIC4.68□□□□□ -1.66
VARS2Q5ST30 AL161651.1-201ENST00000440882 223 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms