Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CD44P16070 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
CD44P16070 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
CD44P16070 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CD44P16070 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
CD44P16070 AC008264.2-201ENST00000610193 3731 ntBASIC5.09□□□□□ -1.6
CD44P16070 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.09□□□□□ -1.6
CD44P16070 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CD44P16070 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CD44P16070 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.08□□□□□ -1.6
CD44P16070 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CD44P16070 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.08□□□□□ -1.6
CD44P16070 RNU6-614P-201ENST00000384369 107 ntBASIC5.08□□□□□ -1.6
CD44P16070 SPTLC1P2-201ENST00000407089 121 ntBASIC5.08□□□□□ -1.6
CD44P16070 AC023141.4-201ENST00000412031 328 ntBASIC5.08□□□□□ -1.6
CD44P16070 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.08□□□□□ -1.6
CD44P16070 RNU1-98P-201ENST00000458992 160 ntBASIC5.08□□□□□ -1.6
CD44P16070 RN7SL177P-201ENST00000476596 299 ntBASIC5.08□□□□□ -1.6
CD44P16070 IGLV2-34-201ENST00000490007 283 ntBASIC5.08□□□□□ -1.6
CD44P16070 RNU6-998P-201ENST00000515894 101 ntBASIC5.08□□□□□ -1.6
CD44P16070 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.08□□□□□ -1.6
CD44P16070 U6.59-201ENST00000615686 107 ntBASIC5.08□□□□□ -1.6
CD44P16070 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC5.08□□□□□ -1.6
CD44P16070 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC5.08□□□□□ -1.6
CD44P16070 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CD44P16070 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CD44P16070 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CD44P16070 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CD44P16070 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CD44P16070 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.07□□□□□ -1.6
CD44P16070 AC021146.4-201ENST00000309229 279 ntBASIC5.07□□□□□ -1.6
CD44P16070 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC5.07□□□□□ -1.6
CD44P16070 AC114811.1-201ENST00000507207 168 ntBASIC5.07□□□□□ -1.6
CD44P16070 HMSD-204ENST00000526932 162 ntTSL 3 BASIC5.07□□□□□ -1.6
CD44P16070 AL358944.1-201ENST00000528537 144 ntBASIC5.07□□□□□ -1.6
CD44P16070 AC091178.1-203ENST00000584586 279 ntBASIC5.07□□□□□ -1.6
CD44P16070 MIR6853-201ENST00000619642 74 ntBASIC5.07□□□□□ -1.6
CD44P16070 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CD44P16070 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CD44P16070 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.07□□□□□ -1.6
CD44P16070 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CD44P16070 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.06□□□□□ -1.6
CD44P16070 Y_RNA.532-201ENST00000384590 113 ntBASIC5.06□□□□□ -1.6
CD44P16070 RNA5SP372-201ENST00000390836 115 ntBASIC5.06□□□□□ -1.6
CD44P16070 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.06□□□□□ -1.6
CD44P16070 RN7SL515P-201ENST00000463999 297 ntBASIC5.06□□□□□ -1.6
CD44P16070 IGLV2-28-201ENST00000520681 304 ntBASIC5.06□□□□□ -1.6
CD44P16070 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.06□□□□□ -1.6
CD44P16070 AC090115.4-201ENST00000609970 188 ntBASIC5.06□□□□□ -1.6
CD44P16070 AC068870.2-201ENST00000620635 389 ntBASIC5.06□□□□□ -1.6
CD44P16070 AC073308.1-201ENST00000623696 305 ntBASIC5.06□□□□□ -1.6
CD44P16070 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CD44P16070 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CD44P16070 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CD44P16070 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CD44P16070 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CD44P16070 MAPK10-263ENST00000641052 4307 ntBASIC5.06□□□□□ -1.6
CD44P16070 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD44P16070 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CD44P16070 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD44P16070 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD44P16070 SNORA63.2-201ENST00000362603 126 ntBASIC5.05□□□□□ -1.6
CD44P16070 SNORA27-201ENST00000384323 126 ntBASIC5.05□□□□□ -1.6
CD44P16070 MIR659-201ENST00000384963 97 ntBASIC5.05□□□□□ -1.6
CD44P16070 RNU11-5P-201ENST00000391216 129 ntBASIC5.05□□□□□ -1.6
CD44P16070 RNU6-587P-201ENST00000391282 106 ntBASIC5.05□□□□□ -1.6
CD44P16070 AL645927.1-201ENST00000396783 406 ntBASIC5.05□□□□□ -1.6
CD44P16070 RNU6-519P-201ENST00000410590 108 ntBASIC5.05□□□□□ -1.6
CD44P16070 snoU13.11-201ENST00000459219 104 ntBASIC5.05□□□□□ -1.6
CD44P16070 RNU7-96P-201ENST00000459535 64 ntBASIC5.05□□□□□ -1.6
CD44P16070 IGLV3-26-201ENST00000520756 302 ntBASIC5.05□□□□□ -1.6
CD44P16070 MIR3667-201ENST00000581025 74 ntBASIC5.05□□□□□ -1.6
CD44P16070 RN7SL753P-201ENST00000581238 290 ntBASIC5.05□□□□□ -1.6
CD44P16070 AC020891.4-201ENST00000605745 93 ntBASIC5.05□□□□□ -1.6
CD44P16070 MIR6719-201ENST00000622428 87 ntBASIC5.05□□□□□ -1.6
CD44P16070 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD44P16070 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
CD44P16070 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC5.05□□□□□ -1.6
CD44P16070 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CD44P16070 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD44P16070 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD44P16070 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD44P16070 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD44P16070 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.05□□□□□ -1.6
CD44P16070 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD44P16070 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.05□□□□□ -1.6
CD44P16070 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.04□□□□□ -1.6
CD44P16070 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD44P16070 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.04□□□□□ -1.6
CD44P16070 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD44P16070 SNORD115-14-201ENST00000363090 81 ntBASIC5.04□□□□□ -1.6
CD44P16070 RN7SKP224-201ENST00000364140 325 ntBASIC5.04□□□□□ -1.6
CD44P16070 Y_RNA.267-201ENST00000364679 109 ntBASIC5.04□□□□□ -1.6
CD44P16070 RNU1-63P-201ENST00000383902 164 ntBASIC5.04□□□□□ -1.6
CD44P16070 AC087499.7-201ENST00000441958 109 ntBASIC5.04□□□□□ -1.6
CD44P16070 RPS29P28-201ENST00000446439 141 ntBASIC5.04□□□□□ -1.6
CD44P16070 PTMAP3-201ENST00000447474 330 ntBASIC5.04□□□□□ -1.6
CD44P16070 SCARNA21.2-201ENST00000516600 166 ntBASIC5.04□□□□□ -1.6
CD44P16070 RNU6-341P-201ENST00000516973 96 ntBASIC5.04□□□□□ -1.6
CD44P16070 ZNF861P-201ENST00000588126 639 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms