Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 SNORD12B-201ENST00000410433 91 ntBASIC3.37□□□□□ -1.87
PTCH2Q9Y6C5 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.37□□□□□ -1.87
PTCH2Q9Y6C5 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.37□□□□□ -1.87
PTCH2Q9Y6C5 AC007395.1-201ENST00000451333 677 ntBASIC3.37□□□□□ -1.87
PTCH2Q9Y6C5 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.37□□□□□ -1.87
PTCH2Q9Y6C5 AC023141.11-201ENST00000508864 202 ntBASIC3.37□□□□□ -1.87
PTCH2Q9Y6C5 Y_RNA.683-201ENST00000516508 93 ntBASIC3.37□□□□□ -1.87
PTCH2Q9Y6C5 RNU6-586P-201ENST00000517265 104 ntBASIC3.37□□□□□ -1.87
PTCH2Q9Y6C5 TCL6_2.1-201ENST00000615162 119 ntBASIC3.37□□□□□ -1.87
PTCH2Q9Y6C5 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PTCH2Q9Y6C5 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTCH2Q9Y6C5 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTCH2Q9Y6C5 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.36□□□□□ -1.87
PTCH2Q9Y6C5 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTCH2Q9Y6C5 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTCH2Q9Y6C5 Y_RNA.179-201ENST00000363844 90 ntBASIC3.36□□□□□ -1.87
PTCH2Q9Y6C5 Y_RNA.183-201ENST00000363882 113 ntBASIC3.36□□□□□ -1.87
PTCH2Q9Y6C5 RNU6-793P-201ENST00000384233 104 ntBASIC3.36□□□□□ -1.87
PTCH2Q9Y6C5 RNU6-851P-201ENST00000384565 107 ntBASIC3.36□□□□□ -1.87
PTCH2Q9Y6C5 MIR329-1-201ENST00000385028 80 ntBASIC3.36□□□□□ -1.87
PTCH2Q9Y6C5 TRIAP1P1-201ENST00000427062 225 ntBASIC3.36□□□□□ -1.87
PTCH2Q9Y6C5 ARL5AP4-201ENST00000430731 512 ntBASIC3.36□□□□□ -1.87
PTCH2Q9Y6C5 AC006539.3-201ENST00000454258 129 ntBASIC3.36□□□□□ -1.87
PTCH2Q9Y6C5 RNU6-397P-201ENST00000516226 104 ntBASIC3.36□□□□□ -1.87
PTCH2Q9Y6C5 HSPE1P18-201ENST00000517602 280 ntBASIC3.36□□□□□ -1.87
PTCH2Q9Y6C5 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.36□□□□□ -1.87
PTCH2Q9Y6C5 MIR4659A-201ENST00000580269 81 ntBASIC3.36□□□□□ -1.87
PTCH2Q9Y6C5 AL713866.2-201ENST00000603579 219 ntBASIC3.36□□□□□ -1.87
PTCH2Q9Y6C5 MIR5739-201ENST00000619803 80 ntBASIC3.36□□□□□ -1.87
PTCH2Q9Y6C5 AC130454.1-201ENST00000622948 401 ntBASIC3.36□□□□□ -1.87
PTCH2Q9Y6C5 MIR7153-201ENST00000637758 57 ntBASIC3.36□□□□□ -1.87
PTCH2Q9Y6C5 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTCH2Q9Y6C5 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTCH2Q9Y6C5 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTCH2Q9Y6C5 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.36□□□□□ -1.87
PTCH2Q9Y6C5 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.35□□□□□ -1.87
PTCH2Q9Y6C5 RNU1-62P-201ENST00000362599 164 ntBASIC3.35□□□□□ -1.87
PTCH2Q9Y6C5 RNU1-72P-201ENST00000362976 153 ntBASIC3.35□□□□□ -1.87
PTCH2Q9Y6C5 RPL21P1-201ENST00000399532 476 ntBASIC3.35□□□□□ -1.87
PTCH2Q9Y6C5 Y_RNA.595-201ENST00000410403 105 ntBASIC3.35□□□□□ -1.87
PTCH2Q9Y6C5 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.35□□□□□ -1.87
PTCH2Q9Y6C5 AL731563.1-201ENST00000442202 214 ntBASIC3.35□□□□□ -1.87
PTCH2Q9Y6C5 CYP2C59P-201ENST00000457790 269 ntBASIC3.35□□□□□ -1.87
PTCH2Q9Y6C5 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.35□□□□□ -1.87
PTCH2Q9Y6C5 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.35□□□□□ -1.87
PTCH2Q9Y6C5 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.35□□□□□ -1.87
PTCH2Q9Y6C5 AC240442.1-201ENST00000616055 283 ntBASIC3.35□□□□□ -1.87
PTCH2Q9Y6C5 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PTCH2Q9Y6C5 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PTCH2Q9Y6C5 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
PTCH2Q9Y6C5 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PTCH2Q9Y6C5 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
PTCH2Q9Y6C5 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
PTCH2Q9Y6C5 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PTCH2Q9Y6C5 RNU6-1145P-201ENST00000384246 107 ntBASIC3.34□□□□□ -1.87
PTCH2Q9Y6C5 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
PTCH2Q9Y6C5 FO393413.1-201ENST00000402892 195 ntBASIC3.34□□□□□ -1.87
PTCH2Q9Y6C5 Y_RNA.597-201ENST00000410463 100 ntBASIC3.34□□□□□ -1.87
PTCH2Q9Y6C5 AC027124.2-201ENST00000428249 105 ntBASIC3.34□□□□□ -1.87
PTCH2Q9Y6C5 CBX3P6-201ENST00000430257 527 ntBASIC3.34□□□□□ -1.87
PTCH2Q9Y6C5 AC092185.1-201ENST00000491371 97 ntBASIC3.34□□□□□ -1.87
PTCH2Q9Y6C5 CKS1BP2-201ENST00000497342 240 ntBASIC3.34□□□□□ -1.87
PTCH2Q9Y6C5 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.34□□□□□ -1.87
PTCH2Q9Y6C5 RNA5SP24-201ENST00000516478 95 ntBASIC3.34□□□□□ -1.87
PTCH2Q9Y6C5 RNU6-897P-201ENST00000517135 105 ntBASIC3.34□□□□□ -1.87
PTCH2Q9Y6C5 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.34□□□□□ -1.87
PTCH2Q9Y6C5 AC004832.5-201ENST00000608677 401 ntBASIC3.34□□□□□ -1.87
PTCH2Q9Y6C5 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
PTCH2Q9Y6C5 AC096644.4-201ENST00000563417 2912 ntBASIC3.33□□□□□ -1.88
PTCH2Q9Y6C5 RNU6-238P-201ENST00000363313 106 ntBASIC3.33□□□□□ -1.88
PTCH2Q9Y6C5 SNORD32B-201ENST00000364460 84 ntBASIC3.33□□□□□ -1.88
PTCH2Q9Y6C5 RNA5SP240-201ENST00000365355 128 ntBASIC3.33□□□□□ -1.88
PTCH2Q9Y6C5 SET-203ENST00000372688 801 ntTSL 2 BASIC3.33□□□□□ -1.88
PTCH2Q9Y6C5 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PTCH2Q9Y6C5 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.33□□□□□ -1.88
PTCH2Q9Y6C5 RNY3P15-201ENST00000516297 97 ntBASIC3.33□□□□□ -1.88
PTCH2Q9Y6C5 SCARNA20.6-201ENST00000517251 106 ntBASIC3.33□□□□□ -1.88
PTCH2Q9Y6C5 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.33□□□□□ -1.88
PTCH2Q9Y6C5 AC064859.1-201ENST00000624741 174 ntBASIC3.33□□□□□ -1.88
PTCH2Q9Y6C5 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PTCH2Q9Y6C5 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTCH2Q9Y6C5 MTND5P35-201ENST00000557537 1720 ntBASIC3.33□□□□□ -1.88
PTCH2Q9Y6C5 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTCH2Q9Y6C5 RNU6-770P-201ENST00000363929 105 ntBASIC3.32□□□□□ -1.88
PTCH2Q9Y6C5 RNU6-926P-201ENST00000384075 107 ntBASIC3.32□□□□□ -1.88
PTCH2Q9Y6C5 RNU6-1274P-201ENST00000384557 107 ntBASIC3.32□□□□□ -1.88
PTCH2Q9Y6C5 Y_RNA.556-201ENST00000384677 113 ntBASIC3.32□□□□□ -1.88
PTCH2Q9Y6C5 MIR549A-201ENST00000385268 96 ntBASIC3.32□□□□□ -1.88
PTCH2Q9Y6C5 SNORA12-201ENST00000391162 147 ntBASIC3.32□□□□□ -1.88
PTCH2Q9Y6C5 MIR1294-201ENST00000408503 142 ntBASIC3.32□□□□□ -1.88
PTCH2Q9Y6C5 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.32□□□□□ -1.88
PTCH2Q9Y6C5 AC009237.7-201ENST00000447357 229 ntBASIC3.32□□□□□ -1.88
PTCH2Q9Y6C5 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.32□□□□□ -1.88
PTCH2Q9Y6C5 AL161670.1-201ENST00000554348 137 ntBASIC3.32□□□□□ -1.88
PTCH2Q9Y6C5 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.32□□□□□ -1.88
PTCH2Q9Y6C5 SNORD53-201ENST00000579969 78 ntBASIC3.32□□□□□ -1.88
PTCH2Q9Y6C5 MIR5006-201ENST00000583027 110 ntBASIC3.32□□□□□ -1.88
PTCH2Q9Y6C5 SNORD11B-201ENST00000607707 90 ntBASIC3.32□□□□□ -1.88
PTCH2Q9Y6C5 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.32□□□□□ -1.88
PTCH2Q9Y6C5 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms