Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CTHRC1Q96CG8 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
CTHRC1Q96CG8 RNA5SP361-201ENST00000362686 118 ntBASIC2.67□□□□□ -1.98
CTHRC1Q96CG8 Y_RNA.193-201ENST00000363979 102 ntBASIC2.67□□□□□ -1.98
CTHRC1Q96CG8 SNORA68.1-201ENST00000364537 132 ntBASIC2.67□□□□□ -1.98
CTHRC1Q96CG8 RNU6-26P-201ENST00000383985 107 ntBASIC2.67□□□□□ -1.98
CTHRC1Q96CG8 MIR512-1-201ENST00000384913 84 ntBASIC2.67□□□□□ -1.98
CTHRC1Q96CG8 MIR1289-1-201ENST00000408836 144 ntBASIC2.67□□□□□ -1.98
CTHRC1Q96CG8 RNU6-1001P-201ENST00000411265 100 ntBASIC2.67□□□□□ -1.98
CTHRC1Q96CG8 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.67□□□□□ -1.98
CTHRC1Q96CG8 AC010095.1-201ENST00000443543 144 ntBASIC2.67□□□□□ -1.98
CTHRC1Q96CG8 PCNPP5-201ENST00000452246 481 ntBASIC2.67□□□□□ -1.98
CTHRC1Q96CG8 AC103975.1-201ENST00000482506 483 ntBASIC2.67□□□□□ -1.98
CTHRC1Q96CG8 SCGB1D5P-201ENST00000515134 247 ntBASIC2.67□□□□□ -1.98
CTHRC1Q96CG8 Y_RNA.683-201ENST00000516508 93 ntBASIC2.67□□□□□ -1.98
CTHRC1Q96CG8 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.67□□□□□ -1.98
CTHRC1Q96CG8 MYL12BP1-201ENST00000569826 507 ntBASIC2.67□□□□□ -1.98
CTHRC1Q96CG8 LARP7P3-201ENST00000579888 337 ntBASIC2.67□□□□□ -1.98
CTHRC1Q96CG8 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.67□□□□□ -1.98
CTHRC1Q96CG8 AC010620.2-201ENST00000600135 313 ntBASIC2.67□□□□□ -1.98
CTHRC1Q96CG8 AL033523.1-201ENST00000605153 153 ntBASIC2.67□□□□□ -1.98
CTHRC1Q96CG8 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CTHRC1Q96CG8 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 Y_RNA.64-201ENST00000362845 102 ntBASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 Y_RNA.143-201ENST00000363520 106 ntBASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 SNORA80A-201ENST00000363922 136 ntBASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 SNORA18.3-201ENST00000384122 132 ntBASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 RNU6-793P-201ENST00000384233 104 ntBASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 Y_RNA.512-201ENST00000384518 102 ntBASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 MIR218-1-201ENST00000384999 110 ntBASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 U6atac.2-201ENST00000408644 118 ntBASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 RNU6-130P-201ENST00000411112 103 ntBASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 EEF1A1P41-201ENST00000414667 207 ntBASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 RN7SL499P-201ENST00000481141 276 ntBASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 RNU6-56P-201ENST00000516986 93 ntBASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 AC023824.2-201ENST00000566185 400 ntBASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 MIR3199-1-201ENST00000582434 88 ntBASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 AC006006.1-201ENST00000603082 144 ntBASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 RPL17P51-201ENST00000605218 238 ntBASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 TCL6_2.1-201ENST00000615162 119 ntBASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 AC011476.5-201ENST00000615594 130 ntBASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CTHRC1Q96CG8 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CTHRC1Q96CG8 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.65□□□□□ -1.98
CTHRC1Q96CG8 LINC02555-201ENST00000563933 1951 ntBASIC2.65□□□□□ -1.98
CTHRC1Q96CG8 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CTHRC1Q96CG8 RNU1-62P-201ENST00000362599 164 ntBASIC2.65□□□□□ -1.99
CTHRC1Q96CG8 Y_RNA.222-201ENST00000364264 102 ntBASIC2.65□□□□□ -1.99
CTHRC1Q96CG8 SNORA46.1-201ENST00000391069 153 ntBASIC2.65□□□□□ -1.99
CTHRC1Q96CG8 AL079342.1-201ENST00000401460 267 ntBASIC2.65□□□□□ -1.99
CTHRC1Q96CG8 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.65□□□□□ -1.99
CTHRC1Q96CG8 COTL1P1-201ENST00000422309 375 ntBASIC2.65□□□□□ -1.99
CTHRC1Q96CG8 AC027124.2-201ENST00000428249 105 ntBASIC2.65□□□□□ -1.99
CTHRC1Q96CG8 AC022018.1-201ENST00000430685 241 ntBASIC2.65□□□□□ -1.99
CTHRC1Q96CG8 LINC01399-202ENST00000458450 244 ntBASIC2.65□□□□□ -1.99
CTHRC1Q96CG8 AP001486.1-201ENST00000463339 476 ntBASIC2.65□□□□□ -1.99
CTHRC1Q96CG8 AL049873.1-201ENST00000480540 376 ntBASIC2.65□□□□□ -1.99
CTHRC1Q96CG8 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.65□□□□□ -1.99
CTHRC1Q96CG8 AP003733.2-201ENST00000529409 171 ntBASIC2.65□□□□□ -1.99
CTHRC1Q96CG8 AC069294.1-201ENST00000608397 350 ntBASIC2.65□□□□□ -1.99
CTHRC1Q96CG8 AC005562.2-201ENST00000618264 111 ntBASIC2.65□□□□□ -1.99
CTHRC1Q96CG8 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CTHRC1Q96CG8 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.65□□□□□ -1.99
CTHRC1Q96CG8 MTND5P35-201ENST00000557537 1720 ntBASIC2.65□□□□□ -1.99
CTHRC1Q96CG8 AC092593.1-201ENST00000515413 1815 ntBASIC2.64□□□□□ -1.99
CTHRC1Q96CG8 MIR549A-201ENST00000385268 96 ntBASIC2.64□□□□□ -1.99
CTHRC1Q96CG8 Y_RNA.618-201ENST00000410949 107 ntBASIC2.64□□□□□ -1.99
CTHRC1Q96CG8 BMS1P22-201ENST00000414726 313 ntBASIC2.64□□□□□ -1.99
CTHRC1Q96CG8 RPL23AP58-201ENST00000440453 469 ntBASIC2.64□□□□□ -1.99
CTHRC1Q96CG8 AC004386.2-201ENST00000441858 148 ntBASIC2.64□□□□□ -1.99
CTHRC1Q96CG8 AC007395.1-201ENST00000451333 677 ntBASIC2.64□□□□□ -1.99
CTHRC1Q96CG8 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.64□□□□□ -1.99
CTHRC1Q96CG8 MIR3671-201ENST00000580455 88 ntBASIC2.64□□□□□ -1.99
CTHRC1Q96CG8 MIR376A1-201ENST00000616574 68 ntBASIC2.64□□□□□ -1.99
CTHRC1Q96CG8 MIR5739-201ENST00000619803 80 ntBASIC2.64□□□□□ -1.99
CTHRC1Q96CG8 AC006386.2-201ENST00000624491 75 ntBASIC2.64□□□□□ -1.99
CTHRC1Q96CG8 AC012005.1-201ENST00000624575 75 ntBASIC2.64□□□□□ -1.99
CTHRC1Q96CG8 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CTHRC1Q96CG8 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CTHRC1Q96CG8 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.64□□□□□ -1.99
CTHRC1Q96CG8 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
CTHRC1Q96CG8 RNU6-806P-201ENST00000365147 105 ntBASIC2.63□□□□□ -1.99
CTHRC1Q96CG8 Y_RNA.461-201ENST00000384263 103 ntBASIC2.63□□□□□ -1.99
CTHRC1Q96CG8 MIR634-201ENST00000385208 97 ntBASIC2.63□□□□□ -1.99
CTHRC1Q96CG8 SNORD115-46-201ENST00000390982 71 ntBASIC2.63□□□□□ -1.99
CTHRC1Q96CG8 RNU5A-5P-201ENST00000411054 116 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 186.1 ms