Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CD44P16070 RNU6-540P-201ENST00000384622 101 ntBASIC5.13□□□□□ -1.59
CD44P16070 GNG5P5-201ENST00000420444 220 ntBASIC5.13□□□□□ -1.59
CD44P16070 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.13□□□□□ -1.59
CD44P16070 FTLP19-201ENST00000433300 394 ntBASIC5.13□□□□□ -1.59
CD44P16070 RN7SL346P-201ENST00000491561 294 ntBASIC5.13□□□□□ -1.59
CD44P16070 RNU6-70P-201ENST00000516438 60 ntBASIC5.13□□□□□ -1.59
CD44P16070 RNU6-1258P-201ENST00000516911 111 ntBASIC5.13□□□□□ -1.59
CD44P16070 TOMM20P2-201ENST00000540082 421 ntBASIC5.13□□□□□ -1.59
CD44P16070 ATP5J2P6-201ENST00000565203 266 ntBASIC5.13□□□□□ -1.59
CD44P16070 HMGN2P15-201ENST00000585707 270 ntBASIC5.13□□□□□ -1.59
CD44P16070 FAM27D1-201ENST00000612308 341 ntBASIC5.13□□□□□ -1.59
CD44P16070 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CD44P16070 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CD44P16070 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CD44P16070 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.13□□□□□ -1.59
CD44P16070 MAPK10-304ENST00000641341 3984 ntBASIC5.13□□□□□ -1.59
CD44P16070 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CD44P16070 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.12□□□□□ -1.59
CD44P16070 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CD44P16070 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.12□□□□□ -1.59
CD44P16070 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CD44P16070 RNU6-234P-201ENST00000365229 104 ntBASIC5.12□□□□□ -1.59
CD44P16070 MIR9-2-201ENST00000384838 87 ntBASIC5.12□□□□□ -1.59
CD44P16070 DBIP2-201ENST00000419076 262 ntBASIC5.12□□□□□ -1.59
CD44P16070 AC083982.1-201ENST00000485679 344 ntBASIC5.12□□□□□ -1.59
CD44P16070 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.12□□□□□ -1.59
CD44P16070 IGHVIII-5-1-201ENST00000523059 99 ntBASIC5.12□□□□□ -1.59
CD44P16070 AL513043.2-201ENST00000573941 143 ntBASIC5.12□□□□□ -1.59
CD44P16070 MIR4433B-201ENST00000581329 102 ntBASIC5.12□□□□□ -1.59
CD44P16070 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CD44P16070 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.12□□□□□ -1.59
CD44P16070 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.12□□□□□ -1.59
CD44P16070 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CD44P16070 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.12□□□□□ -1.59
CD44P16070 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CD44P16070 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.11□□□□□ -1.59
CD44P16070 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CD44P16070 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
CD44P16070 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CD44P16070 AL031595.2-201ENST00000624215 19071 ntBASIC5.11□□□□□ -1.59
CD44P16070 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
CD44P16070 SNORD14E-201ENST00000364009 85 ntBASIC5.11□□□□□ -1.59
CD44P16070 Y_RNA.567-201ENST00000384736 106 ntBASIC5.11□□□□□ -1.59
CD44P16070 RNA5SP239-201ENST00000410218 129 ntBASIC5.11□□□□□ -1.59
CD44P16070 RNA5SP113-201ENST00000410486 84 ntBASIC5.11□□□□□ -1.59
CD44P16070 AC093423.1-201ENST00000440817 142 ntBASIC5.11□□□□□ -1.59
CD44P16070 Y_RNA.681-201ENST00000516445 113 ntBASIC5.11□□□□□ -1.59
CD44P16070 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.11□□□□□ -1.59
CD44P16070 AL390726.5-202ENST00000564800 256 ntBASIC5.11□□□□□ -1.59
CD44P16070 AL391358.1-201ENST00000605342 190 ntBASIC5.11□□□□□ -1.59
CD44P16070 PCAT14-202ENST00000627127 3935 ntBASIC5.11□□□□□ -1.59
CD44P16070 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CD44P16070 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC5.11□□□□□ -1.59
CD44P16070 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CD44P16070 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CD44P16070 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CD44P16070 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CD44P16070 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CD44P16070 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CD44P16070 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CD44P16070 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.1□□□□□ -1.59
CD44P16070 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CD44P16070 Y_RNA.470-201ENST00000384307 117 ntBASIC5.1□□□□□ -1.59
CD44P16070 MIR147B-201ENST00000390185 80 ntBASIC5.1□□□□□ -1.59
CD44P16070 MIR1294-201ENST00000408503 142 ntBASIC5.1□□□□□ -1.59
CD44P16070 COX6B1P1-201ENST00000415962 213 ntBASIC5.1□□□□□ -1.59
CD44P16070 RNU2-34P-201ENST00000516534 121 ntBASIC5.1□□□□□ -1.59
CD44P16070 SCARNA3-201ENST00000517097 143 ntBASIC5.1□□□□□ -1.59
CD44P16070 TRAV8-5-201ENST00000537369 341 ntBASIC5.1□□□□□ -1.59
CD44P16070 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC5.1□□□□□ -1.59
CD44P16070 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CD44P16070 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CD44P16070 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CD44P16070 AC092881.1-201ENST00000638218 2733 ntBASIC5.1□□□□□ -1.59
CD44P16070 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.1□□□□□ -1.59
CD44P16070 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CD44P16070 AC006504.1-201ENST00000562493 3666 ntBASIC5.1□□□□□ -1.59
CD44P16070 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CD44P16070 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CD44P16070 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CD44P16070 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CD44P16070 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CD44P16070 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CD44P16070 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CD44P16070 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.09□□□□□ -1.59
CD44P16070 AL356489.2-201ENST00000566968 3528 ntBASIC5.09□□□□□ -1.59
CD44P16070 AC026523.2-201ENST00000625039 7739 ntBASIC5.09□□□□□ -1.59
CD44P16070 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CD44P16070 MIR34C-201ENST00000384831 77 ntBASIC5.09□□□□□ -1.59
CD44P16070 HSPE1P12-201ENST00000412576 301 ntBASIC5.09□□□□□ -1.59
CD44P16070 TRBV25OR9-2-201ENST00000438417 374 ntBASIC5.09□□□□□ -1.59
CD44P16070 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC5.09□□□□□ -1.59
CD44P16070 SCARNA10-201ENST00000459255 330 ntBASIC5.09□□□□□ -1.59
CD44P16070 AC112771.1-201ENST00000463581 102 ntBASIC5.09□□□□□ -1.59
CD44P16070 RNA5SP33-201ENST00000516687 98 ntBASIC5.09□□□□□ -1.59
CD44P16070 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC5.09□□□□□ -1.59
CD44P16070 AL110118.1-201ENST00000553543 400 ntBASIC5.09□□□□□ -1.59
CD44P16070 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.09□□□□□ -1.59
CD44P16070 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms