Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC112771.1-201ENST00000463581 102 ntBASIC4.42□□□□□ -1.7
HLA-CQ95604 RPL36AP48-201ENST00000485521 314 ntBASIC4.42□□□□□ -1.7
HLA-CQ95604 Y_RNA.677-201ENST00000516401 85 ntBASIC4.42□□□□□ -1.7
HLA-CQ95604 RNU2-58P-201ENST00000516403 183 ntBASIC4.42□□□□□ -1.7
HLA-CQ95604 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-CQ95604 CYCSP40-201ENST00000575927 294 ntBASIC4.42□□□□□ -1.7
HLA-CQ95604 AC105245.1-201ENST00000581934 244 ntBASIC4.42□□□□□ -1.7
HLA-CQ95604 AL049861.1-201ENST00000603130 150 ntBASIC4.42□□□□□ -1.7
HLA-CQ95604 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-CQ95604 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HLA-CQ95604 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-CQ95604 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-CQ95604 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-CQ95604 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-CQ95604 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-CQ95604 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-CQ95604 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-CQ95604 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-CQ95604 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-CQ95604 RNU4-13P-201ENST00000364019 141 ntBASIC4.41□□□□□ -1.7
HLA-CQ95604 SNORA5A-201ENST00000384111 134 ntBASIC4.41□□□□□ -1.7
HLA-CQ95604 RNU6-975P-201ENST00000384296 105 ntBASIC4.41□□□□□ -1.7
HLA-CQ95604 MIR218-2-201ENST00000385006 110 ntBASIC4.41□□□□□ -1.7
HLA-CQ95604 U6atac.2-201ENST00000408644 118 ntBASIC4.41□□□□□ -1.7
HLA-CQ95604 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-CQ95604 AL353705.1-201ENST00000433468 480 ntBASIC4.41□□□□□ -1.7
HLA-CQ95604 AC107934.2-201ENST00000518653 310 ntBASIC4.41□□□□□ -1.7
HLA-CQ95604 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-CQ95604 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-CQ95604 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-CQ95604 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-CQ95604 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-CQ95604 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-CQ95604 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-CQ95604 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-CQ95604 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HLA-CQ95604 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.4□□□□□ -1.7
HLA-CQ95604 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
HLA-CQ95604 MIR1271-201ENST00000408537 86 ntBASIC4.4□□□□□ -1.71
HLA-CQ95604 AC063976.3-201ENST00000426849 329 ntBASIC4.4□□□□□ -1.71
HLA-CQ95604 HMGN2P31-201ENST00000432430 273 ntBASIC4.4□□□□□ -1.71
HLA-CQ95604 AC010099.1-201ENST00000455434 375 ntBASIC4.4□□□□□ -1.71
HLA-CQ95604 GNRHR2P1-201ENST00000555315 631 ntBASIC4.4□□□□□ -1.71
HLA-CQ95604 AC005000.2-201ENST00000605468 310 ntBASIC4.4□□□□□ -1.71
HLA-CQ95604 AL591926.4-201ENST00000616895 298 ntBASIC4.4□□□□□ -1.71
HLA-CQ95604 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.4□□□□□ -1.71
HLA-CQ95604 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-CQ95604 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-CQ95604 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-CQ95604 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HLA-CQ95604 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-CQ95604 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-CQ95604 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-CQ95604 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-CQ95604 AC006504.1-201ENST00000562493 3666 ntBASIC4.39□□□□□ -1.71
HLA-CQ95604 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-CQ95604 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-CQ95604 RNU6-117P-201ENST00000365415 107 ntBASIC4.39□□□□□ -1.71
HLA-CQ95604 MIR30B-201ENST00000384850 88 ntBASIC4.39□□□□□ -1.71
HLA-CQ95604 MIR183-201ENST00000384958 110 ntBASIC4.39□□□□□ -1.71
HLA-CQ95604 MIR891A-201ENST00000401237 79 ntBASIC4.39□□□□□ -1.71
HLA-CQ95604 RNA5SP127-201ENST00000411051 133 ntBASIC4.39□□□□□ -1.71
HLA-CQ95604 AC008134.1-201ENST00000420943 193 ntBASIC4.39□□□□□ -1.71
HLA-CQ95604 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-CQ95604 CYCSP30-201ENST00000546447 172 ntBASIC4.39□□□□□ -1.71
HLA-CQ95604 AL365205.2-201ENST00000594586 68 ntBASIC4.39□□□□□ -1.71
HLA-CQ95604 SCARNA15.3-201ENST00000626315 122 ntBASIC4.39□□□□□ -1.71
HLA-CQ95604 SCARNA4.1-201ENST00000628597 123 ntBASIC4.39□□□□□ -1.71
HLA-CQ95604 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
HLA-CQ95604 AL133412.1-201ENST00000380194 2992 ntBASIC4.39□□□□□ -1.71
HLA-CQ95604 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-CQ95604 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-CQ95604 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-CQ95604 Y_RNA.281-201ENST00000364774 94 ntBASIC4.38□□□□□ -1.71
HLA-CQ95604 RNU6-1138P-201ENST00000365359 106 ntBASIC4.38□□□□□ -1.71
HLA-CQ95604 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-CQ95604 RNU6-781P-201ENST00000516377 101 ntBASIC4.38□□□□□ -1.71
HLA-CQ95604 SNORA18.4-201ENST00000516440 124 ntBASIC4.38□□□□□ -1.71
HLA-CQ95604 RNU6-537P-201ENST00000517277 103 ntBASIC4.38□□□□□ -1.71
HLA-CQ95604 AP000867.2-201ENST00000532468 320 ntBASIC4.38□□□□□ -1.71
HLA-CQ95604 AC018630.3-201ENST00000542637 96 ntBASIC4.38□□□□□ -1.71
HLA-CQ95604 AC015720.1-201ENST00000565251 277 ntBASIC4.38□□□□□ -1.71
HLA-CQ95604 AC091178.1-203ENST00000584586 279 ntBASIC4.38□□□□□ -1.71
HLA-CQ95604 AC106754.2-201ENST00000623006 233 ntBASIC4.38□□□□□ -1.71
HLA-CQ95604 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-CQ95604 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-CQ95604 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-CQ95604 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-CQ95604 AC018555.1-201ENST00000567548 1980 ntBASIC4.38□□□□□ -1.71
HLA-CQ95604 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.38□□□□□ -1.71
HLA-CQ95604 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-CQ95604 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.37□□□□□ -1.71
HLA-CQ95604 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.37□□□□□ -1.71
HLA-CQ95604 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-CQ95604 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-CQ95604 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HLA-CQ95604 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-CQ95604 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-CQ95604 Y_RNA.203-201ENST00000364106 102 ntBASIC4.37□□□□□ -1.71
HLA-CQ95604 ABCF2P2-201ENST00000450549 296 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms