Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 RAB28P5-201ENST00000427490 651 ntBASIC4.16□□□□□ -1.74
RETREG2Q8NC44 AC023141.11-201ENST00000508864 202 ntBASIC4.16□□□□□ -1.74
RETREG2Q8NC44 RNU5F-4P-201ENST00000516581 114 ntBASIC4.16□□□□□ -1.74
RETREG2Q8NC44 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.16□□□□□ -1.74
RETREG2Q8NC44 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.16□□□□□ -1.74
RETREG2Q8NC44 AP001282.2-201ENST00000616149 309 ntBASIC4.16□□□□□ -1.74
RETREG2Q8NC44 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
RETREG2Q8NC44 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RETREG2Q8NC44 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
RETREG2Q8NC44 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.16□□□□□ -1.74
RETREG2Q8NC44 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
RETREG2Q8NC44 Y_RNA.20-201ENST00000362479 113 ntBASIC4.15□□□□□ -1.75
RETREG2Q8NC44 RNU6-1274P-201ENST00000384557 107 ntBASIC4.15□□□□□ -1.75
RETREG2Q8NC44 RNA5SP424-201ENST00000390988 115 ntBASIC4.15□□□□□ -1.75
RETREG2Q8NC44 Z92545.1-201ENST00000411782 234 ntBASIC4.15□□□□□ -1.75
RETREG2Q8NC44 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
RETREG2Q8NC44 AC146507.2-201ENST00000460608 476 ntBASIC4.15□□□□□ -1.75
RETREG2Q8NC44 RAC1P2-201ENST00000511164 579 ntBASIC4.15□□□□□ -1.75
RETREG2Q8NC44 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.15□□□□□ -1.75
RETREG2Q8NC44 RNU6-1338P-201ENST00000516328 91 ntBASIC4.15□□□□□ -1.75
RETREG2Q8NC44 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.15□□□□□ -1.75
RETREG2Q8NC44 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RETREG2Q8NC44 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.15□□□□□ -1.75
RETREG2Q8NC44 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RETREG2Q8NC44 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RETREG2Q8NC44 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
RETREG2Q8NC44 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.14□□□□□ -1.75
RETREG2Q8NC44 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
RETREG2Q8NC44 AC138915.1-201ENST00000565427 1685 ntBASIC4.14□□□□□ -1.75
RETREG2Q8NC44 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RETREG2Q8NC44 MIR410-201ENST00000362222 80 ntBASIC4.14□□□□□ -1.75
RETREG2Q8NC44 RNU1-72P-201ENST00000362976 153 ntBASIC4.14□□□□□ -1.75
RETREG2Q8NC44 RNU6-1175P-201ENST00000365200 107 ntBASIC4.14□□□□□ -1.75
RETREG2Q8NC44 Y_RNA.416-201ENST00000384014 113 ntBASIC4.14□□□□□ -1.75
RETREG2Q8NC44 RNU6-209P-201ENST00000384118 107 ntBASIC4.14□□□□□ -1.75
RETREG2Q8NC44 MIR215-201ENST00000384858 110 ntBASIC4.14□□□□□ -1.75
RETREG2Q8NC44 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RETREG2Q8NC44 Z98941.1-201ENST00000407764 100 ntBASIC4.14□□□□□ -1.75
RETREG2Q8NC44 NDUFB4P10-201ENST00000452541 359 ntBASIC4.14□□□□□ -1.75
RETREG2Q8NC44 AC005042.3-201ENST00000453230 174 ntBASIC4.14□□□□□ -1.75
RETREG2Q8NC44 AC006539.3-201ENST00000454258 129 ntBASIC4.14□□□□□ -1.75
RETREG2Q8NC44 DEFB131C-201ENST00000528817 165 ntBASIC4.14□□□□□ -1.75
RETREG2Q8NC44 MIR5047-201ENST00000579212 100 ntBASIC4.14□□□□□ -1.75
RETREG2Q8NC44 AC012433.1-201ENST00000588916 398 ntBASIC4.14□□□□□ -1.75
RETREG2Q8NC44 AC127459.3-201ENST00000624328 466 ntBASIC4.14□□□□□ -1.75
RETREG2Q8NC44 AC008873.1-201ENST00000625051 138 ntBASIC4.14□□□□□ -1.75
RETREG2Q8NC44 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
RETREG2Q8NC44 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.13□□□□□ -1.75
RETREG2Q8NC44 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.13□□□□□ -1.75
RETREG2Q8NC44 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RETREG2Q8NC44 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RETREG2Q8NC44 RNA5SP267-201ENST00000364893 126 ntBASIC4.13□□□□□ -1.75
RETREG2Q8NC44 Y_RNA.477-201ENST00000384352 108 ntBASIC4.13□□□□□ -1.75
RETREG2Q8NC44 FO393413.1-201ENST00000402892 195 ntBASIC4.13□□□□□ -1.75
RETREG2Q8NC44 RNA5SP475-201ENST00000410568 110 ntBASIC4.13□□□□□ -1.75
RETREG2Q8NC44 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.13□□□□□ -1.75
RETREG2Q8NC44 RPL23AP58-201ENST00000440453 469 ntBASIC4.13□□□□□ -1.75
RETREG2Q8NC44 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.13□□□□□ -1.75
RETREG2Q8NC44 Y_RNA.673-201ENST00000516306 88 ntBASIC4.13□□□□□ -1.75
RETREG2Q8NC44 Y_RNA.700-201ENST00000516806 100 ntBASIC4.13□□□□□ -1.75
RETREG2Q8NC44 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.13□□□□□ -1.75
RETREG2Q8NC44 MIR3674-201ENST00000636576 68 ntBASIC4.13□□□□□ -1.75
RETREG2Q8NC44 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RETREG2Q8NC44 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RETREG2Q8NC44 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RETREG2Q8NC44 RNA5SP197-201ENST00000363357 119 ntBASIC4.12□□□□□ -1.75
RETREG2Q8NC44 RNU6-200P-201ENST00000364743 107 ntBASIC4.12□□□□□ -1.75
RETREG2Q8NC44 Y_RNA.352-201ENST00000365439 102 ntBASIC4.12□□□□□ -1.75
RETREG2Q8NC44 Y_RNA.415-201ENST00000384012 112 ntBASIC4.12□□□□□ -1.75
RETREG2Q8NC44 Y_RNA.541-201ENST00000384640 113 ntBASIC4.12□□□□□ -1.75
RETREG2Q8NC44 MIR634-201ENST00000385208 97 ntBASIC4.12□□□□□ -1.75
RETREG2Q8NC44 SNORA11.2-201ENST00000408318 127 ntBASIC4.12□□□□□ -1.75
RETREG2Q8NC44 RNU2-63P-201ENST00000410792 194 ntBASIC4.12□□□□□ -1.75
RETREG2Q8NC44 ELOCP21-201ENST00000412558 336 ntBASIC4.12□□□□□ -1.75
RETREG2Q8NC44 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.12□□□□□ -1.75
RETREG2Q8NC44 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.12□□□□□ -1.75
RETREG2Q8NC44 TOMM22P2-201ENST00000430735 237 ntBASIC4.12□□□□□ -1.75
RETREG2Q8NC44 AC074290.1-201ENST00000448883 135 ntBASIC4.12□□□□□ -1.75
RETREG2Q8NC44 RNU1-117P-201ENST00000517041 158 ntBASIC4.12□□□□□ -1.75
RETREG2Q8NC44 DEFB108E-201ENST00000524692 240 ntBASIC4.12□□□□□ -1.75
RETREG2Q8NC44 AC098479.1-201ENST00000609225 154 ntBASIC4.12□□□□□ -1.75
RETREG2Q8NC44 AL449363.1-201ENST00000617815 186 ntBASIC4.12□□□□□ -1.75
RETREG2Q8NC44 U7.8-201ENST00000619968 63 ntBASIC4.12□□□□□ -1.75
RETREG2Q8NC44 AC006001.4-201ENST00000622243 395 ntBASIC4.12□□□□□ -1.75
RETREG2Q8NC44 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.12□□□□□ -1.75
RETREG2Q8NC44 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
RETREG2Q8NC44 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RETREG2Q8NC44 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RETREG2Q8NC44 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
RETREG2Q8NC44 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.11□□□□□ -1.75
RETREG2Q8NC44 Y_RNA.117-201ENST00000363294 101 ntBASIC4.11□□□□□ -1.75
RETREG2Q8NC44 U3.8-201ENST00000363675 217 ntBASIC4.11□□□□□ -1.75
RETREG2Q8NC44 Y_RNA.237-201ENST00000364439 102 ntBASIC4.11□□□□□ -1.75
RETREG2Q8NC44 Y_RNA.331-201ENST00000365267 102 ntBASIC4.11□□□□□ -1.75
RETREG2Q8NC44 MIR300-201ENST00000401138 83 ntBASIC4.11□□□□□ -1.75
RETREG2Q8NC44 NDUFB4P4-201ENST00000404822 243 ntBASIC4.11□□□□□ -1.75
RETREG2Q8NC44 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.11□□□□□ -1.75
RETREG2Q8NC44 AC004866.1-201ENST00000411748 78 ntBASIC4.11□□□□□ -1.75
RETREG2Q8NC44 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.11□□□□□ -1.75
RETREG2Q8NC44 RBMY2UP-201ENST00000453474 324 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 252.9 ms