Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.17□□□□□ -1.9
COL4A3BPQ9Y5P4 GTF3AP2-201ENST00000557014 266 ntBASIC3.17□□□□□ -1.9
COL4A3BPQ9Y5P4 AC004584.2-201ENST00000570407 410 ntBASIC3.17□□□□□ -1.9
COL4A3BPQ9Y5P4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL4A3BPQ9Y5P4 CYP2C61P-201ENST00000604072 290 ntBASIC3.17□□□□□ -1.9
COL4A3BPQ9Y5P4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.17□□□□□ -1.9
COL4A3BPQ9Y5P4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.17□□□□□ -1.9
COL4A3BPQ9Y5P4 AC108206.1-201ENST00000570186 4159 ntBASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 VTRNA1-1-201ENST00000363120 99 ntBASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 SNORA5B-201ENST00000363786 132 ntBASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 U8.9-201ENST00000365667 134 ntBASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 Y_RNA.509-201ENST00000384506 99 ntBASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 Y_RNA.510-201ENST00000384511 114 ntBASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 MTND4P28-201ENST00000426217 387 ntBASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 AC105272.1-201ENST00000438604 198 ntBASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 SNORA59A-201ENST00000459326 152 ntBASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 AC022493.2-201ENST00000506122 481 ntBASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 RNU6-470P-201ENST00000515954 104 ntBASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 RNU6-965P-201ENST00000516721 96 ntBASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 AC034114.1-201ENST00000520293 285 ntBASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 SUB1P3-201ENST00000564581 315 ntBASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 ELOCP29-201ENST00000588193 334 ntBASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 AC005562.2-201ENST00000618264 111 ntBASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 AC009487.2-201ENST00000420969 6821 ntBASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
COL4A3BPQ9Y5P4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.15□□□□□ -1.9
COL4A3BPQ9Y5P4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
COL4A3BPQ9Y5P4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
COL4A3BPQ9Y5P4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
COL4A3BPQ9Y5P4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.15□□□□□ -1.9
COL4A3BPQ9Y5P4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
COL4A3BPQ9Y5P4 MAPK10-266ENST00000641066 6555 ntBASIC3.15□□□□□ -1.9
COL4A3BPQ9Y5P4 MIR181A2-201ENST00000384863 110 ntBASIC3.15□□□□□ -1.91
COL4A3BPQ9Y5P4 MIR181B1-201ENST00000385240 110 ntBASIC3.15□□□□□ -1.91
COL4A3BPQ9Y5P4 SNORA26.7-201ENST00000391288 122 ntBASIC3.15□□□□□ -1.91
COL4A3BPQ9Y5P4 AL357139.1-201ENST00000407792 426 ntBASIC3.15□□□□□ -1.91
COL4A3BPQ9Y5P4 MTCO3P29-201ENST00000432119 779 ntBASIC3.15□□□□□ -1.91
COL4A3BPQ9Y5P4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.15□□□□□ -1.91
COL4A3BPQ9Y5P4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.15□□□□□ -1.91
COL4A3BPQ9Y5P4 TOMM22P6-201ENST00000465035 409 ntBASIC3.15□□□□□ -1.91
COL4A3BPQ9Y5P4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.15□□□□□ -1.91
COL4A3BPQ9Y5P4 RNU6-667P-201ENST00000517186 102 ntBASIC3.15□□□□□ -1.91
COL4A3BPQ9Y5P4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.15□□□□□ -1.91
COL4A3BPQ9Y5P4 AP006437.1-201ENST00000641440 3685 ntBASIC3.15□□□□□ -1.91
COL4A3BPQ9Y5P4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
COL4A3BPQ9Y5P4 BX322639.1-202ENST00000423987 2213 ntBASIC3.15□□□□□ -1.91
COL4A3BPQ9Y5P4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.14□□□□□ -1.91
COL4A3BPQ9Y5P4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.14□□□□□ -1.91
COL4A3BPQ9Y5P4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
COL4A3BPQ9Y5P4 MTND4P29-201ENST00000503122 1372 ntBASIC3.14□□□□□ -1.91
COL4A3BPQ9Y5P4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.14□□□□□ -1.91
COL4A3BPQ9Y5P4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
COL4A3BPQ9Y5P4 RNU6-234P-201ENST00000365229 104 ntBASIC3.14□□□□□ -1.91
COL4A3BPQ9Y5P4 RNU6-1040P-201ENST00000383974 107 ntBASIC3.14□□□□□ -1.91
COL4A3BPQ9Y5P4 RNU6-245P-201ENST00000384020 107 ntBASIC3.14□□□□□ -1.91
COL4A3BPQ9Y5P4 Y_RNA.577-201ENST00000384794 101 ntBASIC3.14□□□□□ -1.91
COL4A3BPQ9Y5P4 MIR190B-201ENST00000401119 79 ntBASIC3.14□□□□□ -1.91
COL4A3BPQ9Y5P4 AC087499.2-201ENST00000432861 149 ntBASIC3.14□□□□□ -1.91
COL4A3BPQ9Y5P4 AL035666.1-201ENST00000446195 348 ntBASIC3.14□□□□□ -1.91
COL4A3BPQ9Y5P4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.14□□□□□ -1.91
COL4A3BPQ9Y5P4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.14□□□□□ -1.91
COL4A3BPQ9Y5P4 RNA5SP385-201ENST00000515947 110 ntBASIC3.14□□□□□ -1.91
COL4A3BPQ9Y5P4 RNU6-1170P-201ENST00000515974 106 ntBASIC3.14□□□□□ -1.91
COL4A3BPQ9Y5P4 RN7SKP132-201ENST00000516001 208 ntBASIC3.14□□□□□ -1.91
COL4A3BPQ9Y5P4 RNU5F-4P-201ENST00000516581 114 ntBASIC3.14□□□□□ -1.91
COL4A3BPQ9Y5P4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.14□□□□□ -1.91
COL4A3BPQ9Y5P4 AC016727.2-201ENST00000603988 621 ntBASIC3.14□□□□□ -1.91
COL4A3BPQ9Y5P4 TCL6_2.1-201ENST00000615162 119 ntBASIC3.14□□□□□ -1.91
COL4A3BPQ9Y5P4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
COL4A3BPQ9Y5P4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.14□□□□□ -1.91
COL4A3BPQ9Y5P4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.13□□□□□ -1.91
COL4A3BPQ9Y5P4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL4A3BPQ9Y5P4 RNU6-490P-201ENST00000362985 107 ntBASIC3.13□□□□□ -1.91
COL4A3BPQ9Y5P4 RNU1-91P-201ENST00000364746 163 ntBASIC3.13□□□□□ -1.91
COL4A3BPQ9Y5P4 Y_RNA.460-201ENST00000384255 102 ntBASIC3.13□□□□□ -1.91
COL4A3BPQ9Y5P4 AC027124.2-201ENST00000428249 105 ntBASIC3.13□□□□□ -1.91
COL4A3BPQ9Y5P4 AC092423.1-201ENST00000430165 186 ntBASIC3.13□□□□□ -1.91
COL4A3BPQ9Y5P4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.13□□□□□ -1.91
COL4A3BPQ9Y5P4 AC018868.1-201ENST00000491307 315 ntBASIC3.13□□□□□ -1.91
COL4A3BPQ9Y5P4 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.13□□□□□ -1.91
COL4A3BPQ9Y5P4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.13□□□□□ -1.91
COL4A3BPQ9Y5P4 RNA5SP356-201ENST00000515972 94 ntBASIC3.13□□□□□ -1.91
COL4A3BPQ9Y5P4 RNU7-4P-201ENST00000516961 62 ntBASIC3.13□□□□□ -1.91
COL4A3BPQ9Y5P4 RNU6-58P-201ENST00000517143 103 ntBASIC3.13□□□□□ -1.91
COL4A3BPQ9Y5P4 CYCSP26-201ENST00000534107 320 ntBASIC3.13□□□□□ -1.91
COL4A3BPQ9Y5P4 NDUFA5P6-201ENST00000542110 379 ntBASIC3.13□□□□□ -1.91
COL4A3BPQ9Y5P4 MIR3126-201ENST00000577443 74 ntBASIC3.13□□□□□ -1.91
COL4A3BPQ9Y5P4 AC026271.5-201ENST00000577873 130 ntBASIC3.13□□□□□ -1.91
COL4A3BPQ9Y5P4 AL133255.1-201ENST00000606374 441 ntBASIC3.13□□□□□ -1.91
COL4A3BPQ9Y5P4 AL355802.3-201ENST00000607571 545 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms