Protein–RNA interactions for Protein: Q9BQ66

KRTAP4-12, Keratin-associated protein 4-12, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-12Q9BQ66 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-12Q9BQ66 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-12Q9BQ66 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 MALAT1-202ENST00000534336 8708 ntBASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 NLRP3-204ENST00000366497 4318 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 LCMT1-AS2-202ENST00000565214 5666 ntBASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 FAM47C-201ENST00000358047 3270 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 LAMA3-207ENST00000587184 5007 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 RNA5SP448-201ENST00000363151 111 ntBASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 RNU1-124P-201ENST00000363861 145 ntBASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 RNU1-141P-201ENST00000364623 158 ntBASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 AC104333.2-201ENST00000422630 192 ntBASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 AC108039.2-201ENST00000440214 359 ntBASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 BX293535.1-201ENST00000443579 283 ntTSL 3 BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 snoU13.21-201ENST00000459368 105 ntBASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 AC023424.1-201ENST00000496058 459 ntBASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 RN7SL182P-201ENST00000496499 300 ntBASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 SNORA67.7-201ENST00000516664 135 ntBASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 IGLV1-41-201ENST00000519790 406 ntBASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 AL031846.1-201ENST00000560933 314 ntBASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 AC093249.3-201ENST00000562444 424 ntBASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 DEFB122-202ENST00000569013 197 ntBASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 MIR378H-201ENST00000579966 83 ntBASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 MIR8082-201ENST00000612488 81 ntBASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 CDK2AP2P1-201ENST00000617479 328 ntBASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 MIR6761-201ENST00000617899 72 ntBASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 MIR7515-201ENST00000637837 67 ntBASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 ARID2-201ENST00000334344 8642 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 CNTNAP4-202ENST00000377504 4723 ntTSL 5 BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 SOCS4-202ENST00000395472 6779 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 INTS3-210ENST00000512605 3442 ntTSL 2 BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-12Q9BQ66 LIMCH1-215ENST00000512632 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 DCAF1-202ENST00000423656 5946 ntAPPRIS P4 TSL 5 BASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 SLC6A12-201ENST00000359674 3165 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 ZBTB43-203ENST00000449886 5851 ntAPPRIS P1 TSL 3 BASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 FHIT-201ENST00000341848 174 ntTSL 3 BASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 RNU4-35P-201ENST00000362588 141 ntBASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 RNU6-361P-201ENST00000364454 107 ntBASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 RNA5SP69-201ENST00000364477 117 ntBASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 Y_RNA.382-201ENST00000365672 114 ntBASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 MIR636-201ENST00000384825 99 ntBASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 MIR652-201ENST00000385278 98 ntBASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 RN7SKP206-201ENST00000410823 293 ntBASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 LINC00851-201ENST00000423033 727 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 PPP1R14D-202ENST00000427255 747 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 DEFA11P-201ENST00000446470 261 ntBASIC1.71□□□□□ -2.14
KRTAP4-12Q9BQ66 RN7SL849P-201ENST00000485236 295 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms