Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 SNORA62.3-201ENST00000365110 153 ntBASIC4.35□□□□□ -1.71
SNIP1Q8TAD8 MIR554-201ENST00000384874 96 ntBASIC4.35□□□□□ -1.71
SNIP1Q8TAD8 RN7SKP202-201ENST00000410439 330 ntBASIC4.35□□□□□ -1.71
SNIP1Q8TAD8 RPS29P20-201ENST00000489592 171 ntBASIC4.35□□□□□ -1.71
SNIP1Q8TAD8 RNA5SP236-201ENST00000516169 116 ntBASIC4.35□□□□□ -1.71
SNIP1Q8TAD8 AC021739.1-201ENST00000559631 174 ntBASIC4.35□□□□□ -1.71
SNIP1Q8TAD8 RN7SL176P-201ENST00000580352 264 ntBASIC4.35□□□□□ -1.71
SNIP1Q8TAD8 RNA5SP108-201ENST00000605921 117 ntBASIC4.35□□□□□ -1.71
SNIP1Q8TAD8 AC093732.2-201ENST00000607950 274 ntBASIC4.35□□□□□ -1.71
SNIP1Q8TAD8 5S_rRNA.11-201ENST00000618635 84 ntBASIC4.35□□□□□ -1.71
SNIP1Q8TAD8 MIR6075-201ENST00000620782 95 ntBASIC4.35□□□□□ -1.71
SNIP1Q8TAD8 BMS1P21-201ENST00000634565 365 ntBASIC4.35□□□□□ -1.71
SNIP1Q8TAD8 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.35□□□□□ -1.71
SNIP1Q8TAD8 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNIP1Q8TAD8 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNIP1Q8TAD8 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.34□□□□□ -1.71
SNIP1Q8TAD8 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNIP1Q8TAD8 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.34□□□□□ -1.71
SNIP1Q8TAD8 SPRR2C-201ENST00000290702 219 ntBASIC4.34□□□□□ -1.71
SNIP1Q8TAD8 Y_RNA.342-201ENST00000365352 113 ntBASIC4.34□□□□□ -1.71
SNIP1Q8TAD8 MIR181B1-201ENST00000385240 110 ntBASIC4.34□□□□□ -1.71
SNIP1Q8TAD8 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.34□□□□□ -1.71
SNIP1Q8TAD8 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.34□□□□□ -1.71
SNIP1Q8TAD8 RNA5SP143-201ENST00000516936 115 ntBASIC4.34□□□□□ -1.71
SNIP1Q8TAD8 AC023632.4-201ENST00000517783 191 ntBASIC4.34□□□□□ -1.71
SNIP1Q8TAD8 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.34□□□□□ -1.71
SNIP1Q8TAD8 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.34□□□□□ -1.71
SNIP1Q8TAD8 AC105137.2-201ENST00000569073 466 ntBASIC4.34□□□□□ -1.71
SNIP1Q8TAD8 SNX18P1Y-201ENST00000616231 511 ntBASIC4.34□□□□□ -1.71
SNIP1Q8TAD8 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SNIP1Q8TAD8 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNIP1Q8TAD8 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNIP1Q8TAD8 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.34□□□□□ -1.71
SNIP1Q8TAD8 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNIP1Q8TAD8 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SNIP1Q8TAD8 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.72
SNIP1Q8TAD8 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.72
SNIP1Q8TAD8 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.34□□□□□ -1.72
SNIP1Q8TAD8 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
SNIP1Q8TAD8 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
SNIP1Q8TAD8 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 AL356292.1-201ENST00000283110 373 ntBASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 RNU6-529P-201ENST00000363383 104 ntBASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 Y_RNA.244-201ENST00000364484 109 ntBASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 MIR659-201ENST00000384963 97 ntBASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 SNORA11.1-201ENST00000408133 129 ntBASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 Y_RNA.593-201ENST00000410292 98 ntBASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 AC007064.1-201ENST00000412238 351 ntBASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 AC008134.1-201ENST00000420943 193 ntBASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 NDUFB1P1-201ENST00000435191 180 ntBASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 SCARNA10-201ENST00000459255 330 ntBASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 RN7SL542P-201ENST00000467147 294 ntBASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 PARP4P3-201ENST00000510265 317 ntBASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 MRPS36P2-201ENST00000512569 299 ntBASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 RNA5SP249-201ENST00000516127 99 ntBASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 GNRHR2P1-201ENST00000555315 631 ntBASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 AC093249.4-201ENST00000564755 259 ntBASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 MIR5009-201ENST00000578736 100 ntBASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 AL365205.2-201ENST00000594586 68 ntBASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 AL137067.1-201ENST00000615933 120 ntBASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 AL159152.1-201ENST00000635019 2587 ntBASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 Z73965.1-201ENST00000623412 2297 ntBASIC4.33□□□□□ -1.72
SNIP1Q8TAD8 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SNIP1Q8TAD8 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.32□□□□□ -1.72
SNIP1Q8TAD8 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.32□□□□□ -1.72
SNIP1Q8TAD8 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SNIP1Q8TAD8 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SNIP1Q8TAD8 MIR383-201ENST00000362257 73 ntBASIC4.32□□□□□ -1.72
SNIP1Q8TAD8 RNU6-1305P-201ENST00000364353 104 ntBASIC4.32□□□□□ -1.72
SNIP1Q8TAD8 Y_RNA.366-201ENST00000365540 102 ntBASIC4.32□□□□□ -1.72
SNIP1Q8TAD8 RNU6-1181P-201ENST00000384191 106 ntBASIC4.32□□□□□ -1.72
SNIP1Q8TAD8 MIR493-201ENST00000385254 89 ntBASIC4.32□□□□□ -1.72
SNIP1Q8TAD8 SNORA26-201ENST00000391286 122 ntBASIC4.32□□□□□ -1.72
SNIP1Q8TAD8 MIR1185-2-201ENST00000408687 86 ntBASIC4.32□□□□□ -1.72
SNIP1Q8TAD8 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.32□□□□□ -1.72
SNIP1Q8TAD8 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.32□□□□□ -1.72
SNIP1Q8TAD8 AC083906.5-201ENST00000503722 328 ntBASIC4.32□□□□□ -1.72
SNIP1Q8TAD8 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.32□□□□□ -1.72
SNIP1Q8TAD8 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.32□□□□□ -1.72
SNIP1Q8TAD8 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC4.32□□□□□ -1.72
SNIP1Q8TAD8 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.32□□□□□ -1.72
SNIP1Q8TAD8 MIR3202-2-201ENST00000635980 79 ntBASIC4.32□□□□□ -1.72
SNIP1Q8TAD8 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SNIP1Q8TAD8 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SNIP1Q8TAD8 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SNIP1Q8TAD8 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.32□□□□□ -1.72
SNIP1Q8TAD8 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SNIP1Q8TAD8 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms