Protein–RNA interactions for Protein: Q9BYR7

KRTAP3-2, Keratin-associated protein 3-2, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-2Q9BYR7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 DOCK11P1-201ENST00000553480 5932 ntBASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 RNU6-247P-201ENST00000362636 107 ntBASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 SNORD8-201ENST00000363915 110 ntBASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 SNORA70.3-201ENST00000365075 132 ntBASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 MIR181C-201ENST00000384881 110 ntBASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 SNORA48.1-201ENST00000390879 135 ntBASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 RNU6-269P-201ENST00000391077 97 ntBASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 AC098934.3-201ENST00000430450 190 ntBASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 AC009474.2-201ENST00000451383 136 ntBASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 TRBV12-2-201ENST00000489763 344 ntBASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 RNU6-1265P-201ENST00000516342 103 ntBASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 RN7SL199P-201ENST00000578752 281 ntBASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 RN7SL656P-201ENST00000579044 281 ntBASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 RN7SL404P-201ENST00000582421 281 ntBASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 AC090699.1-201ENST00000586264 321 ntBASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 AC021506.2-201ENST00000612354 169 ntBASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 Evf-2_5p.1-201ENST00000614213 142 ntBASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 HLA-B-257ENST00000640094 147 ntBASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 UG0898H09-202ENST00000623646 7040 ntBASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
KRTAP3-2Q9BYR7 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 IPO8P1-201ENST00000455509 3109 ntBASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 SELENOWP1-201ENST00000322792 252 ntBASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 RNA5SP396-201ENST00000364834 120 ntBASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 LCN1P2-201ENST00000372030 223 ntBASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 AC099782.1-201ENST00000425889 474 ntBASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 AL590399.4-201ENST00000436561 601 ntBASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 AC069285.2-201ENST00000440210 275 ntBASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 AC114801.1-201ENST00000512633 297 ntBASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 RNU6-231P-201ENST00000517122 103 ntBASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 IGHVIII-11-1-201ENST00000522733 267 ntBASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 IGLVV-66-201ENST00000523818 341 ntBASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 AP005639.1-201ENST00000526939 192 ntBASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 AC073916.1-201ENST00000545095 130 ntBASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 SIGLEC31P-201ENST00000594237 551 ntBASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 Six3os1_4.1-201ENST00000615706 324 ntBASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 AP005212.3-201ENST00000619964 528 ntBASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 CPHL1P-201ENST00000461341 3407 ntBASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-2Q9BYR7 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC3.17□□□□□ -1.9
KRTAP3-2Q9BYR7 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP3-2Q9BYR7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP3-2Q9BYR7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
KRTAP3-2Q9BYR7 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP3-2Q9BYR7 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP3-2Q9BYR7 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP3-2Q9BYR7 FHIT-201ENST00000341848 174 ntTSL 3 BASIC3.17□□□□□ -1.9
KRTAP3-2Q9BYR7 Y_RNA.330-201ENST00000365230 109 ntBASIC3.17□□□□□ -1.9
KRTAP3-2Q9BYR7 RNU6-171P-201ENST00000384354 107 ntBASIC3.17□□□□□ -1.9
KRTAP3-2Q9BYR7 RNU6ATAC29P-201ENST00000408088 125 ntBASIC3.17□□□□□ -1.9
KRTAP3-2Q9BYR7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.17□□□□□ -1.9
KRTAP3-2Q9BYR7 S100A11P1-201ENST00000477525 312 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms