Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 AC008556.1-201ENST00000610908 2040 ntBASIC23.21■■□□□ 1.31
TNFRSF11AQ9Y6Q6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
TNFRSF11AQ9Y6Q6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC23.21■■□□□ 1.31
TNFRSF11AQ9Y6Q6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TNFRSF11AQ9Y6Q6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TNFRSF11AQ9Y6Q6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TNFRSF11AQ9Y6Q6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
TNFRSF11AQ9Y6Q6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC23.21■■□□□ 1.31
TNFRSF11AQ9Y6Q6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TNFRSF11AQ9Y6Q6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNFRSF11AQ9Y6Q6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNFRSF11AQ9Y6Q6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNFRSF11AQ9Y6Q6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC23.2■■□□□ 1.3
TNFRSF11AQ9Y6Q6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNFRSF11AQ9Y6Q6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC23.2■■□□□ 1.3
TNFRSF11AQ9Y6Q6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC23.2■■□□□ 1.3
TNFRSF11AQ9Y6Q6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNFRSF11AQ9Y6Q6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNFRSF11AQ9Y6Q6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC23.2■■□□□ 1.3
TNFRSF11AQ9Y6Q6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC23.2■■□□□ 1.3
TNFRSF11AQ9Y6Q6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
TNFRSF11AQ9Y6Q6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNFRSF11AQ9Y6Q6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
TNFRSF11AQ9Y6Q6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNFRSF11AQ9Y6Q6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNFRSF11AQ9Y6Q6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
TNFRSF11AQ9Y6Q6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
TNFRSF11AQ9Y6Q6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC23.19■■□□□ 1.3
TNFRSF11AQ9Y6Q6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
TNFRSF11AQ9Y6Q6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC23.19■■□□□ 1.3
TNFRSF11AQ9Y6Q6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC23.19■■□□□ 1.3
TNFRSF11AQ9Y6Q6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TNFRSF11AQ9Y6Q6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC23.19■■□□□ 1.3
TNFRSF11AQ9Y6Q6 MIR1224-201ENST00000408193 85 ntBASIC23.19■■□□□ 1.3
TNFRSF11AQ9Y6Q6 WWOX-216ENST00000569818 525 ntBASIC23.19■■□□□ 1.3
TNFRSF11AQ9Y6Q6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
TNFRSF11AQ9Y6Q6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC23.19■■□□□ 1.3
TNFRSF11AQ9Y6Q6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TNFRSF11AQ9Y6Q6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TNFRSF11AQ9Y6Q6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TNFRSF11AQ9Y6Q6 AC036111.1-201ENST00000533973 1582 ntBASIC23.18■■□□□ 1.3
TNFRSF11AQ9Y6Q6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC23.18■■□□□ 1.3
TNFRSF11AQ9Y6Q6 KRT8P32-201ENST00000512863 1461 ntBASIC23.18■■□□□ 1.3
TNFRSF11AQ9Y6Q6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
TNFRSF11AQ9Y6Q6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TNFRSF11AQ9Y6Q6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
TNFRSF11AQ9Y6Q6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TNFRSF11AQ9Y6Q6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TNFRSF11AQ9Y6Q6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC23.18■■□□□ 1.3
TNFRSF11AQ9Y6Q6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC23.18■■□□□ 1.3
TNFRSF11AQ9Y6Q6 DUX4L26-201ENST00000489078 1255 ntBASIC23.18■■□□□ 1.3
TNFRSF11AQ9Y6Q6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TNFRSF11AQ9Y6Q6 AL441883.1-201ENST00000566170 1045 ntBASIC23.18■■□□□ 1.3
TNFRSF11AQ9Y6Q6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
TNFRSF11AQ9Y6Q6 AL023973.1-201ENST00000624619 620 ntBASIC23.18■■□□□ 1.3
TNFRSF11AQ9Y6Q6 RCC2P3-201ENST00000418112 1537 ntBASIC23.18■■□□□ 1.3
TNFRSF11AQ9Y6Q6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
TNFRSF11AQ9Y6Q6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC23.17■■□□□ 1.3
TNFRSF11AQ9Y6Q6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TNFRSF11AQ9Y6Q6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC23.17■■□□□ 1.3
TNFRSF11AQ9Y6Q6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC23.17■■□□□ 1.3
TNFRSF11AQ9Y6Q6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
TNFRSF11AQ9Y6Q6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TNFRSF11AQ9Y6Q6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TNFRSF11AQ9Y6Q6 AC009947.2-201ENST00000444014 672 ntBASIC23.17■■□□□ 1.3
TNFRSF11AQ9Y6Q6 AC011558.1-201ENST00000623459 338 ntBASIC23.17■■□□□ 1.3
TNFRSF11AQ9Y6Q6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TNFRSF11AQ9Y6Q6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TNFRSF11AQ9Y6Q6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC23.17■■□□□ 1.3
TNFRSF11AQ9Y6Q6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TNFRSF11AQ9Y6Q6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TNFRSF11AQ9Y6Q6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TNFRSF11AQ9Y6Q6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC23.16■■□□□ 1.3
TNFRSF11AQ9Y6Q6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TNFRSF11AQ9Y6Q6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TNFRSF11AQ9Y6Q6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TNFRSF11AQ9Y6Q6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC23.16■■□□□ 1.3
TNFRSF11AQ9Y6Q6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TNFRSF11AQ9Y6Q6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TNFRSF11AQ9Y6Q6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TNFRSF11AQ9Y6Q6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TNFRSF11AQ9Y6Q6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TNFRSF11AQ9Y6Q6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC23.16■■□□□ 1.3
TNFRSF11AQ9Y6Q6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
TNFRSF11AQ9Y6Q6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
TNFRSF11AQ9Y6Q6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC23.16■■□□□ 1.3
TNFRSF11AQ9Y6Q6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC23.16■■□□□ 1.3
TNFRSF11AQ9Y6Q6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TNFRSF11AQ9Y6Q6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TNFRSF11AQ9Y6Q6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TNFRSF11AQ9Y6Q6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TNFRSF11AQ9Y6Q6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
TNFRSF11AQ9Y6Q6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC23.15■■□□□ 1.3
TNFRSF11AQ9Y6Q6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
TNFRSF11AQ9Y6Q6 AC006333.2-201ENST00000607957 2099 ntBASIC23.15■■□□□ 1.3
TNFRSF11AQ9Y6Q6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TNFRSF11AQ9Y6Q6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
TNFRSF11AQ9Y6Q6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TNFRSF11AQ9Y6Q6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC23.15■■□□□ 1.3
TNFRSF11AQ9Y6Q6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms