Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 AC131212.4-201ENST00000623606 975 ntBASIC21.65■■□□□ 1.06
CLIC4Q9Y696 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 AC090164.3-201ENST00000610780 2143 ntBASIC21.65■■□□□ 1.06
CLIC4Q9Y696 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC4Q9Y696 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CLIC4Q9Y696 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
CLIC4Q9Y696 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.64■■□□□ 1.06
CLIC4Q9Y696 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLIC4Q9Y696 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.64■■□□□ 1.05
CLIC4Q9Y696 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.64■■□□□ 1.05
CLIC4Q9Y696 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.64■■□□□ 1.05
CLIC4Q9Y696 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.64■■□□□ 1.05
CLIC4Q9Y696 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CLIC4Q9Y696 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CLIC4Q9Y696 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.64■■□□□ 1.05
CLIC4Q9Y696 AC091390.4-202ENST00000476426 537 ntBASIC21.64■■□□□ 1.05
CLIC4Q9Y696 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
CLIC4Q9Y696 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.64■■□□□ 1.05
CLIC4Q9Y696 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
CLIC4Q9Y696 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.64■■□□□ 1.05
CLIC4Q9Y696 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.64■■□□□ 1.05
CLIC4Q9Y696 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.64■■□□□ 1.05
CLIC4Q9Y696 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLIC4Q9Y696 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.64■■□□□ 1.05
CLIC4Q9Y696 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.64■■□□□ 1.05
CLIC4Q9Y696 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.64■■□□□ 1.05
CLIC4Q9Y696 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.64■■□□□ 1.05
CLIC4Q9Y696 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CLIC4Q9Y696 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLIC4Q9Y696 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CLIC4Q9Y696 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.63■■□□□ 1.05
CLIC4Q9Y696 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.63■■□□□ 1.05
CLIC4Q9Y696 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLIC4Q9Y696 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.63■■□□□ 1.05
CLIC4Q9Y696 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.63■■□□□ 1.05
CLIC4Q9Y696 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLIC4Q9Y696 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLIC4Q9Y696 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLIC4Q9Y696 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLIC4Q9Y696 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLIC4Q9Y696 RCC2P6-201ENST00000526625 1557 ntBASIC21.63■■□□□ 1.05
CLIC4Q9Y696 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLIC4Q9Y696 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLIC4Q9Y696 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLIC4Q9Y696 AC008040.2-201ENST00000461049 708 ntBASIC21.63■■□□□ 1.05
CLIC4Q9Y696 AP002982.1-201ENST00000492365 877 ntBASIC21.63■■□□□ 1.05
CLIC4Q9Y696 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CLIC4Q9Y696 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.63■■□□□ 1.05
CLIC4Q9Y696 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.63■■□□□ 1.05
CLIC4Q9Y696 AL353708.3-201ENST00000610272 989 ntBASIC21.63■■□□□ 1.05
CLIC4Q9Y696 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.63■■□□□ 1.05
CLIC4Q9Y696 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.63■■□□□ 1.05
CLIC4Q9Y696 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLIC4Q9Y696 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CLIC4Q9Y696 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CLIC4Q9Y696 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CLIC4Q9Y696 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
CLIC4Q9Y696 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLIC4Q9Y696 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CLIC4Q9Y696 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLIC4Q9Y696 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLIC4Q9Y696 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.62■■□□□ 1.05
CLIC4Q9Y696 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLIC4Q9Y696 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLIC4Q9Y696 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.62■■□□□ 1.05
CLIC4Q9Y696 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.62■■□□□ 1.05
CLIC4Q9Y696 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms