Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.64■□□□□ 0.41
CLDN16Q9Y5I7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDN16Q9Y5I7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CLDN16Q9Y5I7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDN16Q9Y5I7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
CLDN16Q9Y5I7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.64■□□□□ 0.41
CLDN16Q9Y5I7 AC068587.9-201ENST00000641814 219 ntBASIC17.64■□□□□ 0.41
CLDN16Q9Y5I7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN16Q9Y5I7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.64■□□□□ 0.41
CLDN16Q9Y5I7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN16Q9Y5I7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN16Q9Y5I7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CLDN16Q9Y5I7 AC006333.2-201ENST00000607957 2099 ntBASIC17.63■□□□□ 0.41
CLDN16Q9Y5I7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN16Q9Y5I7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN16Q9Y5I7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN16Q9Y5I7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN16Q9Y5I7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN16Q9Y5I7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN16Q9Y5I7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN16Q9Y5I7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN16Q9Y5I7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.63■□□□□ 0.41
CLDN16Q9Y5I7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN16Q9Y5I7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN16Q9Y5I7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN16Q9Y5I7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN16Q9Y5I7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CLDN16Q9Y5I7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CLDN16Q9Y5I7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.63■□□□□ 0.41
CLDN16Q9Y5I7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN16Q9Y5I7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN16Q9Y5I7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN16Q9Y5I7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.63■□□□□ 0.41
CLDN16Q9Y5I7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 RCC2P3-201ENST00000418112 1537 ntBASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 AL109659.2-201ENST00000606809 1674 ntBASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 CR769767.2-201ENST00000622735 460 ntBASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN16Q9Y5I7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 AC008556.1-201ENST00000610908 2040 ntBASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 WWOX-216ENST00000569818 525 ntBASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 HEIH-201ENST00000623091 1652 ntBASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN16Q9Y5I7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN16Q9Y5I7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.6■□□□□ 0.41
CLDN16Q9Y5I7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN16Q9Y5I7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CLDN16Q9Y5I7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.6■□□□□ 0.41
CLDN16Q9Y5I7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.6■□□□□ 0.41
CLDN16Q9Y5I7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.6■□□□□ 0.41
CLDN16Q9Y5I7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDN16Q9Y5I7 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms