Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHA3Q9Y5H8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHA3Q9Y5H8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHA3Q9Y5H8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
PCDHA3Q9Y5H8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 Z85996.1-201ENST00000494644 937 ntBASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 AL354751.1-201ENST00000412768 1863 ntBASIC19.82■□□□□ 0.76
PCDHA3Q9Y5H8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHA3Q9Y5H8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHA3Q9Y5H8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHA3Q9Y5H8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PCDHA3Q9Y5H8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PCDHA3Q9Y5H8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.81■□□□□ 0.76
PCDHA3Q9Y5H8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHA3Q9Y5H8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDHA3Q9Y5H8 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDHA3Q9Y5H8 RNA5SP413-201ENST00000516373 109 ntBASIC19.81■□□□□ 0.76
PCDHA3Q9Y5H8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.81■□□□□ 0.76
PCDHA3Q9Y5H8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
PCDHA3Q9Y5H8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDHA3Q9Y5H8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHA3Q9Y5H8 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHA3Q9Y5H8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.81■□□□□ 0.76
PCDHA3Q9Y5H8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.81■□□□□ 0.76
PCDHA3Q9Y5H8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHA3Q9Y5H8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHA3Q9Y5H8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHA3Q9Y5H8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHA3Q9Y5H8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHA3Q9Y5H8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHA3Q9Y5H8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PCDHA3Q9Y5H8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHA3Q9Y5H8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDHA3Q9Y5H8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PCDHA3Q9Y5H8 RCC2P6-201ENST00000526625 1557 ntBASIC19.8■□□□□ 0.76
PCDHA3Q9Y5H8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHA3Q9Y5H8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHA3Q9Y5H8 POU5F1P3-201ENST00000428824 1078 ntBASIC19.8■□□□□ 0.76
PCDHA3Q9Y5H8 KRT16P5-201ENST00000455284 522 ntBASIC19.8■□□□□ 0.76
PCDHA3Q9Y5H8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
PCDHA3Q9Y5H8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PCDHA3Q9Y5H8 AL023875.1-201ENST00000640777 796 ntBASIC19.8■□□□□ 0.76
PCDHA3Q9Y5H8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHA3Q9Y5H8 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHA3Q9Y5H8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHA3Q9Y5H8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHA3Q9Y5H8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
PCDHA3Q9Y5H8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHA3Q9Y5H8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHA3Q9Y5H8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHA3Q9Y5H8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.8■□□□□ 0.76
PCDHA3Q9Y5H8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PCDHA3Q9Y5H8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHA3Q9Y5H8 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.79■□□□□ 0.76
PCDHA3Q9Y5H8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHA3Q9Y5H8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHA3Q9Y5H8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHA3Q9Y5H8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHA3Q9Y5H8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDHA3Q9Y5H8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDHA3Q9Y5H8 HEIH-201ENST00000623091 1652 ntBASIC19.79■□□□□ 0.76
PCDHA3Q9Y5H8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHA3Q9Y5H8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHA3Q9Y5H8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHA3Q9Y5H8 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHA3Q9Y5H8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PCDHA3Q9Y5H8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDHA3Q9Y5H8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDHA3Q9Y5H8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms