Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 TSPY20P-201ENST00000450910 630 ntBASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 AC006333.2-201ENST00000607957 2099 ntBASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 KRT8P41-201ENST00000533985 1514 ntBASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PCDHGA11Q9Y5H2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 Z85996.1-201ENST00000494644 937 ntBASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 FAM197Y4-202ENST00000622692 608 ntBASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA11Q9Y5H2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA11Q9Y5H2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PCDHGA11Q9Y5H2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHGA11Q9Y5H2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHGA11Q9Y5H2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA11Q9Y5H2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
PCDHGA11Q9Y5H2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PCDHGA11Q9Y5H2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA11Q9Y5H2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA11Q9Y5H2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA11Q9Y5H2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA11Q9Y5H2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA11Q9Y5H2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA11Q9Y5H2 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.36■□□□□ 0.53
PCDHGA11Q9Y5H2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHGA11Q9Y5H2 TSPY23P-201ENST00000440136 739 ntBASIC18.36■□□□□ 0.53
PCDHGA11Q9Y5H2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA11Q9Y5H2 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHGA11Q9Y5H2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.36■□□□□ 0.53
PCDHGA11Q9Y5H2 RARRES2P10-201ENST00000564312 460 ntBASIC18.36■□□□□ 0.53
PCDHGA11Q9Y5H2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHGA11Q9Y5H2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA11Q9Y5H2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHGA11Q9Y5H2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PCDHGA11Q9Y5H2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA11Q9Y5H2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA11Q9Y5H2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms