Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 HMGA1P5-201ENST00000412453 271 ntBASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 SLC25A1P2-201ENST00000430693 912 ntBASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 BX664615.1-201ENST00000443558 458 ntBASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 FAM207BP-201ENST00000447172 505 ntBASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 AC008040.2-201ENST00000461049 708 ntBASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 AC116562.4-202ENST00000641738 218 ntBASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 KRT8P8-201ENST00000434750 1448 ntBASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 MFAP1P1-201ENST00000442257 1255 ntBASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 CCR12P-201ENST00000446203 998 ntBASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA6Q9Y5G7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA6Q9Y5G7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA6Q9Y5G7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA6Q9Y5G7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGA6Q9Y5G7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGA6Q9Y5G7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGA6Q9Y5G7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGA6Q9Y5G7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA6Q9Y5G7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA6Q9Y5G7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PCDHGA6Q9Y5G7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA6Q9Y5G7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA6Q9Y5G7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA6Q9Y5G7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHGA6Q9Y5G7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGA6Q9Y5G7 AC010653.2-201ENST00000623505 997 ntBASIC18.24■□□□□ 0.51
PCDHGA6Q9Y5G7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
PCDHGA6Q9Y5G7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA6Q9Y5G7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA6Q9Y5G7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGA6Q9Y5G7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHGA6Q9Y5G7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA6Q9Y5G7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PCDHGA6Q9Y5G7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PCDHGA6Q9Y5G7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA6Q9Y5G7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGA6Q9Y5G7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA6Q9Y5G7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA6Q9Y5G7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA6Q9Y5G7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PCDHGA6Q9Y5G7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGA6Q9Y5G7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
PCDHGA6Q9Y5G7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms