Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTCBQ9Y3I0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
RTCBQ9Y3I0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTCBQ9Y3I0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTCBQ9Y3I0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.91■■□□□ 1.42
RTCBQ9Y3I0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
RTCBQ9Y3I0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC23.91■■□□□ 1.42
RTCBQ9Y3I0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTCBQ9Y3I0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTCBQ9Y3I0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTCBQ9Y3I0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTCBQ9Y3I0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTCBQ9Y3I0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RTCBQ9Y3I0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTCBQ9Y3I0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC23.91■■□□□ 1.42
RTCBQ9Y3I0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC23.91■■□□□ 1.42
RTCBQ9Y3I0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC23.91■■□□□ 1.42
RTCBQ9Y3I0 AC074051.2-201ENST00000565115 352 ntBASIC23.91■■□□□ 1.42
RTCBQ9Y3I0 AC005332.3-201ENST00000589904 676 ntBASIC23.91■■□□□ 1.42
RTCBQ9Y3I0 AL121912.1-201ENST00000603683 238 ntBASIC23.91■■□□□ 1.42
RTCBQ9Y3I0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
RTCBQ9Y3I0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC23.91■■□□□ 1.42
RTCBQ9Y3I0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
RTCBQ9Y3I0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTCBQ9Y3I0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTCBQ9Y3I0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
RTCBQ9Y3I0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTCBQ9Y3I0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
RTCBQ9Y3I0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTCBQ9Y3I0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RTCBQ9Y3I0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RTCBQ9Y3I0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTCBQ9Y3I0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
RTCBQ9Y3I0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RTCBQ9Y3I0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTCBQ9Y3I0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTCBQ9Y3I0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTCBQ9Y3I0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC23.9■■□□□ 1.42
RTCBQ9Y3I0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTCBQ9Y3I0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RTCBQ9Y3I0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC23.9■■□□□ 1.42
RTCBQ9Y3I0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTCBQ9Y3I0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC23.9■■□□□ 1.42
RTCBQ9Y3I0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC23.9■■□□□ 1.42
RTCBQ9Y3I0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RTCBQ9Y3I0 TK1-205ENST00000590862 642 ntTSL 3 BASIC23.9■■□□□ 1.42
RTCBQ9Y3I0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC23.9■■□□□ 1.42
RTCBQ9Y3I0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC23.9■■□□□ 1.42
RTCBQ9Y3I0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RTCBQ9Y3I0 IGHV3-41-201ENST00000613121 348 ntBASIC23.9■■□□□ 1.42
RTCBQ9Y3I0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
RTCBQ9Y3I0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTCBQ9Y3I0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTCBQ9Y3I0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTCBQ9Y3I0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RTCBQ9Y3I0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
RTCBQ9Y3I0 MRPL3P1-201ENST00000400109 1033 ntBASIC23.89■■□□□ 1.41
RTCBQ9Y3I0 KRT18P23-201ENST00000435622 1283 ntBASIC23.89■■□□□ 1.41
RTCBQ9Y3I0 KRT16P4-201ENST00000453883 522 ntBASIC23.89■■□□□ 1.41
RTCBQ9Y3I0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC23.89■■□□□ 1.41
RTCBQ9Y3I0 AL353801.3-201ENST00000609898 542 ntBASIC23.89■■□□□ 1.41
RTCBQ9Y3I0 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RTCBQ9Y3I0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC23.89■■□□□ 1.41
RTCBQ9Y3I0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RTCBQ9Y3I0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC23.89■■□□□ 1.41
RTCBQ9Y3I0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RTCBQ9Y3I0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RTCBQ9Y3I0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
RTCBQ9Y3I0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RTCBQ9Y3I0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
RTCBQ9Y3I0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
RTCBQ9Y3I0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC23.88■■□□□ 1.41
RTCBQ9Y3I0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RTCBQ9Y3I0 KRT8P7-201ENST00000533003 1432 ntBASIC23.88■■□□□ 1.41
RTCBQ9Y3I0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RTCBQ9Y3I0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RTCBQ9Y3I0 AP000593.1-201ENST00000393668 712 ntBASIC23.88■■□□□ 1.41
RTCBQ9Y3I0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RTCBQ9Y3I0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC23.88■■□□□ 1.41
RTCBQ9Y3I0 AP003733.1-201ENST00000491725 852 ntBASIC23.88■■□□□ 1.41
RTCBQ9Y3I0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC23.88■■□□□ 1.41
RTCBQ9Y3I0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC23.88■■□□□ 1.41
RTCBQ9Y3I0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC23.88■■□□□ 1.41
RTCBQ9Y3I0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC23.88■■□□□ 1.41
RTCBQ9Y3I0 AC010240.3-201ENST00000607688 395 ntBASIC23.88■■□□□ 1.41
RTCBQ9Y3I0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
RTCBQ9Y3I0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RTCBQ9Y3I0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RTCBQ9Y3I0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.88■■□□□ 1.41
RTCBQ9Y3I0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
RTCBQ9Y3I0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTCBQ9Y3I0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RTCBQ9Y3I0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTCBQ9Y3I0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC23.87■■□□□ 1.41
RTCBQ9Y3I0 AC104390.1-201ENST00000555663 520 ntBASIC23.87■■□□□ 1.41
RTCBQ9Y3I0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC23.87■■□□□ 1.41
RTCBQ9Y3I0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC23.87■■□□□ 1.41
RTCBQ9Y3I0 AL390719.2-201ENST00000606993 987 ntBASIC23.87■■□□□ 1.41
RTCBQ9Y3I0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTCBQ9Y3I0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms