Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
SPG7Q9UQ90 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
SPG7Q9UQ90 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
SPG7Q9UQ90 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SPG7Q9UQ90 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
SPG7Q9UQ90 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SPG7Q9UQ90 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC24.77■■□□□ 1.56
SPG7Q9UQ90 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC24.77■■□□□ 1.56
SPG7Q9UQ90 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SPG7Q9UQ90 AL157888.1-201ENST00000631930 593 ntBASIC24.77■■□□□ 1.56
SPG7Q9UQ90 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
SPG7Q9UQ90 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SPG7Q9UQ90 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SPG7Q9UQ90 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SPG7Q9UQ90 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SPG7Q9UQ90 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SPG7Q9UQ90 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
SPG7Q9UQ90 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
SPG7Q9UQ90 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
SPG7Q9UQ90 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC24.76■■□□□ 1.55
SPG7Q9UQ90 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SPG7Q9UQ90 HLA-F-220ENST00000434407 884 ntBASIC24.76■■□□□ 1.55
SPG7Q9UQ90 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC24.76■■□□□ 1.55
SPG7Q9UQ90 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC24.76■■□□□ 1.55
SPG7Q9UQ90 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC24.76■■□□□ 1.55
SPG7Q9UQ90 PRR29-207ENST00000580752 458 ntTSL 3 BASIC24.76■■□□□ 1.55
SPG7Q9UQ90 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
SPG7Q9UQ90 IRF5-214ENST00000613821 595 ntTSL 5 BASIC24.76■■□□□ 1.55
SPG7Q9UQ90 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
SPG7Q9UQ90 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SPG7Q9UQ90 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC24.76■■□□□ 1.55
SPG7Q9UQ90 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
SPG7Q9UQ90 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC24.76■■□□□ 1.55
SPG7Q9UQ90 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
SPG7Q9UQ90 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
SPG7Q9UQ90 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC24.76■■□□□ 1.55
SPG7Q9UQ90 AL162741.1-201ENST00000565563 1558 ntBASIC24.76■■□□□ 1.55
SPG7Q9UQ90 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SPG7Q9UQ90 AC112907.3-201ENST00000577781 2400 ntBASIC24.75■■□□□ 1.55
SPG7Q9UQ90 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SPG7Q9UQ90 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC24.75■■□□□ 1.55
SPG7Q9UQ90 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC24.75■■□□□ 1.55
SPG7Q9UQ90 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SPG7Q9UQ90 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SPG7Q9UQ90 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC24.75■■□□□ 1.55
SPG7Q9UQ90 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC24.75■■□□□ 1.55
SPG7Q9UQ90 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC24.75■■□□□ 1.55
SPG7Q9UQ90 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC24.75■■□□□ 1.55
SPG7Q9UQ90 MIR3917-201ENST00000580971 93 ntBASIC24.75■■□□□ 1.55
SPG7Q9UQ90 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC24.75■■□□□ 1.55
SPG7Q9UQ90 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
SPG7Q9UQ90 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC24.75■■□□□ 1.55
SPG7Q9UQ90 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
SPG7Q9UQ90 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SPG7Q9UQ90 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC24.75■■□□□ 1.55
SPG7Q9UQ90 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SPG7Q9UQ90 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC24.74■■□□□ 1.55
SPG7Q9UQ90 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC24.74■■□□□ 1.55
SPG7Q9UQ90 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SPG7Q9UQ90 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC24.74■■□□□ 1.55
SPG7Q9UQ90 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC24.74■■□□□ 1.55
SPG7Q9UQ90 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
SPG7Q9UQ90 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC24.74■■□□□ 1.55
SPG7Q9UQ90 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC24.74■■□□□ 1.55
SPG7Q9UQ90 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC24.74■■□□□ 1.55
SPG7Q9UQ90 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC24.74■■□□□ 1.55
SPG7Q9UQ90 PRELID1P1-202ENST00000567272 903 ntBASIC24.74■■□□□ 1.55
SPG7Q9UQ90 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC24.74■■□□□ 1.55
SPG7Q9UQ90 MIR3180-1-201ENST00000580374 94 ntBASIC24.74■■□□□ 1.55
SPG7Q9UQ90 MIR3180-3-201ENST00000584616 94 ntBASIC24.74■■□□□ 1.55
SPG7Q9UQ90 SPEG-225ENST00000617028 815 ntTSL 5 BASIC24.74■■□□□ 1.55
SPG7Q9UQ90 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SPG7Q9UQ90 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
SPG7Q9UQ90 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SPG7Q9UQ90 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC24.74■■□□□ 1.55
SPG7Q9UQ90 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
SPG7Q9UQ90 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC24.74■■□□□ 1.55
SPG7Q9UQ90 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
SPG7Q9UQ90 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
SPG7Q9UQ90 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SPG7Q9UQ90 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC24.73■■□□□ 1.55
SPG7Q9UQ90 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
SPG7Q9UQ90 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
SPG7Q9UQ90 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SPG7Q9UQ90 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SPG7Q9UQ90 AC093525.10-201ENST00000625130 1569 ntBASIC24.73■■□□□ 1.55
SPG7Q9UQ90 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
SPG7Q9UQ90 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SPG7Q9UQ90 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SPG7Q9UQ90 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SPG7Q9UQ90 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
SPG7Q9UQ90 SDHD-206ENST00000528182 754 ntTSL 3 BASIC24.73■■□□□ 1.55
SPG7Q9UQ90 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC24.73■■□□□ 1.55
SPG7Q9UQ90 WDR6-223ENST00000627177 207 ntTSL 2 BASIC24.73■■□□□ 1.55
SPG7Q9UQ90 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC24.73■■□□□ 1.55
SPG7Q9UQ90 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
SPG7Q9UQ90 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC24.73■■□□□ 1.55
SPG7Q9UQ90 Z82202.1-201ENST00000623446 1880 ntBASIC24.72■■□□□ 1.55
SPG7Q9UQ90 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC24.72■■□□□ 1.55
SPG7Q9UQ90 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms