Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 AL121894.2-201ENST00000602977 491 ntBASIC18.54■□□□□ 0.56
SATB2Q9UPW6 AC011558.1-201ENST00000623459 338 ntBASIC18.54■□□□□ 0.56
SATB2Q9UPW6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SATB2Q9UPW6 AC092338.2-201ENST00000568827 1415 ntBASIC18.54■□□□□ 0.56
SATB2Q9UPW6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SATB2Q9UPW6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SATB2Q9UPW6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.54■□□□□ 0.56
SATB2Q9UPW6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SATB2Q9UPW6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.54■□□□□ 0.56
SATB2Q9UPW6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SATB2Q9UPW6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SATB2Q9UPW6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SATB2Q9UPW6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SATB2Q9UPW6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.54■□□□□ 0.56
SATB2Q9UPW6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.53■□□□□ 0.56
SATB2Q9UPW6 TMEM179-206ENST00000616017 1645 ntBASIC18.53■□□□□ 0.56
SATB2Q9UPW6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SATB2Q9UPW6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SATB2Q9UPW6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SATB2Q9UPW6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
SATB2Q9UPW6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SATB2Q9UPW6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.53■□□□□ 0.56
SATB2Q9UPW6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SATB2Q9UPW6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.53■□□□□ 0.56
SATB2Q9UPW6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
SATB2Q9UPW6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.53■□□□□ 0.56
SATB2Q9UPW6 PCED1CP-201ENST00000419887 785 ntBASIC18.53■□□□□ 0.56
SATB2Q9UPW6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SATB2Q9UPW6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.53■□□□□ 0.56
SATB2Q9UPW6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.53■□□□□ 0.56
SATB2Q9UPW6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SATB2Q9UPW6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.53■□□□□ 0.56
SATB2Q9UPW6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SATB2Q9UPW6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SATB2Q9UPW6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SATB2Q9UPW6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SATB2Q9UPW6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.53■□□□□ 0.56
SATB2Q9UPW6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SATB2Q9UPW6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SATB2Q9UPW6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SATB2Q9UPW6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SATB2Q9UPW6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SATB2Q9UPW6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.52■□□□□ 0.56
SATB2Q9UPW6 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.52■□□□□ 0.56
SATB2Q9UPW6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.52■□□□□ 0.56
SATB2Q9UPW6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SATB2Q9UPW6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SATB2Q9UPW6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SATB2Q9UPW6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SATB2Q9UPW6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.52■□□□□ 0.56
SATB2Q9UPW6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.52■□□□□ 0.56
SATB2Q9UPW6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SATB2Q9UPW6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SATB2Q9UPW6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SATB2Q9UPW6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.52■□□□□ 0.56
SATB2Q9UPW6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.52■□□□□ 0.56
SATB2Q9UPW6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.52■□□□□ 0.56
SATB2Q9UPW6 TSPY17P-201ENST00000450329 467 ntBASIC18.52■□□□□ 0.56
SATB2Q9UPW6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.52■□□□□ 0.56
SATB2Q9UPW6 Z85996.1-201ENST00000494644 937 ntBASIC18.52■□□□□ 0.56
SATB2Q9UPW6 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.52■□□□□ 0.56
SATB2Q9UPW6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.52■□□□□ 0.56
SATB2Q9UPW6 KRT126P-201ENST00000549467 1181 ntBASIC18.52■□□□□ 0.56
SATB2Q9UPW6 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.52■□□□□ 0.56
SATB2Q9UPW6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.52■□□□□ 0.56
SATB2Q9UPW6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.52■□□□□ 0.56
SATB2Q9UPW6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
SATB2Q9UPW6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
SATB2Q9UPW6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SATB2Q9UPW6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SATB2Q9UPW6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SATB2Q9UPW6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SATB2Q9UPW6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SATB2Q9UPW6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SATB2Q9UPW6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SATB2Q9UPW6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.52■□□□□ 0.55
SATB2Q9UPW6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.55
SATB2Q9UPW6 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.52■□□□□ 0.55
SATB2Q9UPW6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.52■□□□□ 0.55
SATB2Q9UPW6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
SATB2Q9UPW6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.51■□□□□ 0.55
SATB2Q9UPW6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
SATB2Q9UPW6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SATB2Q9UPW6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SATB2Q9UPW6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SATB2Q9UPW6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SATB2Q9UPW6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.51■□□□□ 0.55
SATB2Q9UPW6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SATB2Q9UPW6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.51■□□□□ 0.55
SATB2Q9UPW6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SATB2Q9UPW6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SATB2Q9UPW6 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.51■□□□□ 0.55
SATB2Q9UPW6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
SATB2Q9UPW6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.51■□□□□ 0.55
SATB2Q9UPW6 FAM86EP-206ENST00000510506 987 ntBASIC18.51■□□□□ 0.55
SATB2Q9UPW6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.51■□□□□ 0.55
SATB2Q9UPW6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.51■□□□□ 0.55
SATB2Q9UPW6 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.51■□□□□ 0.55
SATB2Q9UPW6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
SATB2Q9UPW6 AL023803.3-201ENST00000615559 522 ntBASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms