Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 Z99916.2-201ENST00000604037 246 ntBASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 AC113410.3-201ENST00000623366 203 ntBASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRNA9Q9UGM1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 FP475955.4-201ENST00000623131 1990 ntBASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA9Q9UGM1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 IRX1P1-201ENST00000438849 1838 ntBASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 TSPY23P-201ENST00000440136 739 ntBASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 MIR6786-201ENST00000616843 113 ntBASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 AC011298.2-201ENST00000617989 482 ntBASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 FSCN1P1-201ENST00000568912 1481 ntBASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA9Q9UGM1 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 AC091390.4-202ENST00000476426 537 ntBASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 NUDT16P1-203ENST00000513809 620 ntBASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.28■□□□□ 0.36
CHRNA9Q9UGM1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms