Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DNMT3BQ9UBC3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DNMT3BQ9UBC3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.79■□□□□ 0.76
DNMT3BQ9UBC3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.79■□□□□ 0.76
DNMT3BQ9UBC3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
DNMT3BQ9UBC3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 TPM4P1-201ENST00000436100 807 ntBASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 AC034232.1-201ENST00000506026 1064 ntBASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DNMT3BQ9UBC3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DNMT3BQ9UBC3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DNMT3BQ9UBC3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DNMT3BQ9UBC3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
DNMT3BQ9UBC3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DNMT3BQ9UBC3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DNMT3BQ9UBC3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DNMT3BQ9UBC3 AL645929.1-201ENST00000420084 975 ntBASIC19.77■□□□□ 0.76
DNMT3BQ9UBC3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.77■□□□□ 0.76
DNMT3BQ9UBC3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.77■□□□□ 0.76
DNMT3BQ9UBC3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DNMT3BQ9UBC3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DNMT3BQ9UBC3 NPAP1P7-201ENST00000613027 823 ntBASIC19.77■□□□□ 0.76
DNMT3BQ9UBC3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
DNMT3BQ9UBC3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DNMT3BQ9UBC3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.77■□□□□ 0.76
DNMT3BQ9UBC3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
DNMT3BQ9UBC3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
DNMT3BQ9UBC3 TREX1-205ENST00000625293 1783 ntBASIC19.77■□□□□ 0.76
DNMT3BQ9UBC3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
DNMT3BQ9UBC3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
DNMT3BQ9UBC3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
DNMT3BQ9UBC3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
DNMT3BQ9UBC3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
DNMT3BQ9UBC3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
DNMT3BQ9UBC3 PKD1P6-201ENST00000343738 4769 ntBASIC19.76■□□□□ 0.75
DNMT3BQ9UBC3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
DNMT3BQ9UBC3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DNMT3BQ9UBC3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DNMT3BQ9UBC3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DNMT3BQ9UBC3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.76■□□□□ 0.75
DNMT3BQ9UBC3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.76■□□□□ 0.75
DNMT3BQ9UBC3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DNMT3BQ9UBC3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.76■□□□□ 0.75
DNMT3BQ9UBC3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.76■□□□□ 0.75
DNMT3BQ9UBC3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.76■□□□□ 0.75
DNMT3BQ9UBC3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.76■□□□□ 0.75
DNMT3BQ9UBC3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.76■□□□□ 0.75
DNMT3BQ9UBC3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.76■□□□□ 0.75
DNMT3BQ9UBC3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DNMT3BQ9UBC3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.76■□□□□ 0.75
DNMT3BQ9UBC3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DNMT3BQ9UBC3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DNMT3BQ9UBC3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DNMT3BQ9UBC3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
DNMT3BQ9UBC3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DNMT3BQ9UBC3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DNMT3BQ9UBC3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.75■□□□□ 0.75
DNMT3BQ9UBC3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
DNMT3BQ9UBC3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
DNMT3BQ9UBC3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DNMT3BQ9UBC3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.75■□□□□ 0.75
DNMT3BQ9UBC3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DNMT3BQ9UBC3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.75■□□□□ 0.75
DNMT3BQ9UBC3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DNMT3BQ9UBC3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DNMT3BQ9UBC3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DNMT3BQ9UBC3 MCCD1P1-208ENST00000445732 328 ntBASIC19.75■□□□□ 0.75
DNMT3BQ9UBC3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
DNMT3BQ9UBC3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.75■□□□□ 0.75
DNMT3BQ9UBC3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DNMT3BQ9UBC3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
DNMT3BQ9UBC3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.75■□□□□ 0.75
DNMT3BQ9UBC3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
DNMT3BQ9UBC3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.75■□□□□ 0.75
DNMT3BQ9UBC3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.75■□□□□ 0.75
DNMT3BQ9UBC3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms