Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM248Q9NWD8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM248Q9NWD8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.38■□□□□ 0.69
TMEM248Q9NWD8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM248Q9NWD8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.38■□□□□ 0.69
TMEM248Q9NWD8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.38■□□□□ 0.69
TMEM248Q9NWD8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.38■□□□□ 0.69
TMEM248Q9NWD8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.38■□□□□ 0.69
TMEM248Q9NWD8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.38■□□□□ 0.69
TMEM248Q9NWD8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TMEM248Q9NWD8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.38■□□□□ 0.69
TMEM248Q9NWD8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.38■□□□□ 0.69
TMEM248Q9NWD8 KRT8P32-201ENST00000512863 1461 ntBASIC19.38■□□□□ 0.69
TMEM248Q9NWD8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
TMEM248Q9NWD8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM248Q9NWD8 FAM87A-204ENST00000613235 858 ntBASIC19.38■□□□□ 0.69
TMEM248Q9NWD8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.38■□□□□ 0.69
TMEM248Q9NWD8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.38■□□□□ 0.69
TMEM248Q9NWD8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM248Q9NWD8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM248Q9NWD8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM248Q9NWD8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM248Q9NWD8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM248Q9NWD8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM248Q9NWD8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.37■□□□□ 0.69
TMEM248Q9NWD8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM248Q9NWD8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TMEM248Q9NWD8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM248Q9NWD8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TMEM248Q9NWD8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM248Q9NWD8 ECEL1P2-202ENST00000465689 757 ntBASIC19.37■□□□□ 0.69
TMEM248Q9NWD8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.37■□□□□ 0.69
TMEM248Q9NWD8 MIR4674-201ENST00000582457 87 ntBASIC19.37■□□□□ 0.69
TMEM248Q9NWD8 LINC01023-201ENST00000606054 436 ntBASIC19.37■□□□□ 0.69
TMEM248Q9NWD8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.37■□□□□ 0.69
TMEM248Q9NWD8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM248Q9NWD8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM248Q9NWD8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.37■□□□□ 0.69
TMEM248Q9NWD8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM248Q9NWD8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TMEM248Q9NWD8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM248Q9NWD8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.37■□□□□ 0.69
TMEM248Q9NWD8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TMEM248Q9NWD8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM248Q9NWD8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM248Q9NWD8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM248Q9NWD8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM248Q9NWD8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM248Q9NWD8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.36■□□□□ 0.69
TMEM248Q9NWD8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM248Q9NWD8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TMEM248Q9NWD8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.36■□□□□ 0.69
TMEM248Q9NWD8 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.36■□□□□ 0.69
TMEM248Q9NWD8 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.36■□□□□ 0.69
TMEM248Q9NWD8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.36■□□□□ 0.69
TMEM248Q9NWD8 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.36■□□□□ 0.69
TMEM248Q9NWD8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
TMEM248Q9NWD8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.36■□□□□ 0.69
TMEM248Q9NWD8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.36■□□□□ 0.69
TMEM248Q9NWD8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TMEM248Q9NWD8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.36■□□□□ 0.69
TMEM248Q9NWD8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TMEM248Q9NWD8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM248Q9NWD8 GPAT2P1-201ENST00000444924 1672 ntBASIC19.36■□□□□ 0.69
TMEM248Q9NWD8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM248Q9NWD8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TMEM248Q9NWD8 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 AL023284.2-201ENST00000405850 579 ntBASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 AC083906.6-201ENST00000641366 219 ntBASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TMEM248Q9NWD8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM248Q9NWD8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM248Q9NWD8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.34■□□□□ 0.69
TMEM248Q9NWD8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms