Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2LQ9NUG4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
CCM2LQ9NUG4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2LQ9NUG4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2LQ9NUG4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2LQ9NUG4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2LQ9NUG4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.04■□□□□ 0.48
CCM2LQ9NUG4 ANO7L1-203ENST00000602586 1720 ntBASIC18.04■□□□□ 0.48
CCM2LQ9NUG4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2LQ9NUG4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2LQ9NUG4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2LQ9NUG4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
CCM2LQ9NUG4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2LQ9NUG4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2LQ9NUG4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2LQ9NUG4 UNC93B5-201ENST00000530315 699 ntBASIC18.04■□□□□ 0.48
CCM2LQ9NUG4 AP003097.1-201ENST00000530657 1135 ntBASIC18.04■□□□□ 0.48
CCM2LQ9NUG4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.04■□□□□ 0.48
CCM2LQ9NUG4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.04■□□□□ 0.48
CCM2LQ9NUG4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2LQ9NUG4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.04■□□□□ 0.48
CCM2LQ9NUG4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CCM2LQ9NUG4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CCM2LQ9NUG4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2LQ9NUG4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2LQ9NUG4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2LQ9NUG4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.04■□□□□ 0.48
CCM2LQ9NUG4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 SDHAP1-207ENST00000440850 2000 ntBASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 MIR1224-201ENST00000408193 85 ntBASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 ECEL1P3-201ENST00000427961 737 ntBASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 AC104417.2-201ENST00000562989 1793 ntBASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 AC010980.2-201ENST00000587099 1412 ntBASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2LQ9NUG4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCM2LQ9NUG4 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.02■□□□□ 0.47
CCM2LQ9NUG4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms