Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GCM1Q9NP62 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
GCM1Q9NP62 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.21■□□□□ 0.18
GCM1Q9NP62 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
GCM1Q9NP62 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.2■□□□□ 0.18
GCM1Q9NP62 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GCM1Q9NP62 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GCM1Q9NP62 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GCM1Q9NP62 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.2■□□□□ 0.18
GCM1Q9NP62 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GCM1Q9NP62 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
GCM1Q9NP62 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
GCM1Q9NP62 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.2■□□□□ 0.18
GCM1Q9NP62 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
GCM1Q9NP62 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.2■□□□□ 0.18
GCM1Q9NP62 AC097488.1-201ENST00000507834 756 ntBASIC16.2■□□□□ 0.18
GCM1Q9NP62 BX088651.1-201ENST00000540551 451 ntBASIC16.2■□□□□ 0.18
GCM1Q9NP62 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.2■□□□□ 0.18
GCM1Q9NP62 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.2■□□□□ 0.18
GCM1Q9NP62 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.2■□□□□ 0.18
GCM1Q9NP62 AP000525.1-201ENST00000608286 694 ntBASIC16.2■□□□□ 0.18
GCM1Q9NP62 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GCM1Q9NP62 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
GCM1Q9NP62 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GCM1Q9NP62 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
GCM1Q9NP62 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GCM1Q9NP62 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
GCM1Q9NP62 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GCM1Q9NP62 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
GCM1Q9NP62 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.19■□□□□ 0.18
GCM1Q9NP62 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.19■□□□□ 0.18
GCM1Q9NP62 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
GCM1Q9NP62 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GCM1Q9NP62 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.19■□□□□ 0.18
GCM1Q9NP62 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
GCM1Q9NP62 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.19■□□□□ 0.18
GCM1Q9NP62 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
GCM1Q9NP62 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
GCM1Q9NP62 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GCM1Q9NP62 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GCM1Q9NP62 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
GCM1Q9NP62 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.19■□□□□ 0.18
GCM1Q9NP62 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.19■□□□□ 0.18
GCM1Q9NP62 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GCM1Q9NP62 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
GCM1Q9NP62 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GCM1Q9NP62 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GCM1Q9NP62 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GCM1Q9NP62 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.19■□□□□ 0.18
GCM1Q9NP62 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GCM1Q9NP62 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.19■□□□□ 0.18
GCM1Q9NP62 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
GCM1Q9NP62 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
GCM1Q9NP62 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GCM1Q9NP62 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
GCM1Q9NP62 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
GCM1Q9NP62 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GCM1Q9NP62 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GCM1Q9NP62 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
GCM1Q9NP62 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
GCM1Q9NP62 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.19■□□□□ 0.18
GCM1Q9NP62 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
GCM1Q9NP62 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
GCM1Q9NP62 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.18■□□□□ 0.18
GCM1Q9NP62 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GCM1Q9NP62 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GCM1Q9NP62 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GCM1Q9NP62 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GCM1Q9NP62 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GCM1Q9NP62 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GCM1Q9NP62 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GCM1Q9NP62 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GCM1Q9NP62 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GCM1Q9NP62 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GCM1Q9NP62 TSPY21P-201ENST00000433481 731 ntBASIC16.18■□□□□ 0.18
GCM1Q9NP62 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.18■□□□□ 0.18
GCM1Q9NP62 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GCM1Q9NP62 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.18■□□□□ 0.18
GCM1Q9NP62 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.18■□□□□ 0.18
GCM1Q9NP62 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GCM1Q9NP62 SLC25A1P4-201ENST00000567977 778 ntBASIC16.18■□□□□ 0.18
GCM1Q9NP62 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.18■□□□□ 0.18
GCM1Q9NP62 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.18■□□□□ 0.18
GCM1Q9NP62 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
GCM1Q9NP62 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.18■□□□□ 0.18
GCM1Q9NP62 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
GCM1Q9NP62 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GCM1Q9NP62 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
GCM1Q9NP62 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GCM1Q9NP62 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
GCM1Q9NP62 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
GCM1Q9NP62 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.18■□□□□ 0.18
GCM1Q9NP62 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
GCM1Q9NP62 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GCM1Q9NP62 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
GCM1Q9NP62 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.17■□□□□ 0.18
GCM1Q9NP62 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GCM1Q9NP62 AL032819.2-201ENST00000624543 2162 ntBASIC16.17■□□□□ 0.18
GCM1Q9NP62 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GCM1Q9NP62 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms