Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPAP3Q9H6T3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.82■■□□□ 1.08
RPAP3Q9H6T3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.82■■□□□ 1.08
RPAP3Q9H6T3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.82■■□□□ 1.08
RPAP3Q9H6T3 AC079602.3-201ENST00000623931 403 ntBASIC21.82■■□□□ 1.08
RPAP3Q9H6T3 AC112497.1-201ENST00000624824 639 ntBASIC21.82■■□□□ 1.08
RPAP3Q9H6T3 AL157888.1-201ENST00000631930 593 ntBASIC21.82■■□□□ 1.08
RPAP3Q9H6T3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
RPAP3Q9H6T3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.82■■□□□ 1.08
RPAP3Q9H6T3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPAP3Q9H6T3 AC125437.2-201ENST00000625180 2167 ntBASIC21.82■■□□□ 1.08
RPAP3Q9H6T3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPAP3Q9H6T3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.82■■□□□ 1.08
RPAP3Q9H6T3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPAP3Q9H6T3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.82■■□□□ 1.08
RPAP3Q9H6T3 PCDHAC2-203ENST00000615316 3011 ntBASIC21.82■■□□□ 1.08
RPAP3Q9H6T3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
RPAP3Q9H6T3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RPAP3Q9H6T3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.81■■□□□ 1.08
RPAP3Q9H6T3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RPAP3Q9H6T3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPAP3Q9H6T3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPAP3Q9H6T3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RPAP3Q9H6T3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPAP3Q9H6T3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPAP3Q9H6T3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RPAP3Q9H6T3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPAP3Q9H6T3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.81■■□□□ 1.08
RPAP3Q9H6T3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPAP3Q9H6T3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPAP3Q9H6T3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RPAP3Q9H6T3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPAP3Q9H6T3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPAP3Q9H6T3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.81■■□□□ 1.08
RPAP3Q9H6T3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.81■■□□□ 1.08
RPAP3Q9H6T3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RPAP3Q9H6T3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.81■■□□□ 1.08
RPAP3Q9H6T3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RPAP3Q9H6T3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RPAP3Q9H6T3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPAP3Q9H6T3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RPAP3Q9H6T3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPAP3Q9H6T3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RPAP3Q9H6T3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 AC011498.5-201ENST00000592027 486 ntBASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RPAP3Q9H6T3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RPAP3Q9H6T3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPAP3Q9H6T3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPAP3Q9H6T3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPAP3Q9H6T3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPAP3Q9H6T3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPAP3Q9H6T3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPAP3Q9H6T3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPAP3Q9H6T3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RPAP3Q9H6T3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.79■■□□□ 1.08
RPAP3Q9H6T3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
RPAP3Q9H6T3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.79■■□□□ 1.08
RPAP3Q9H6T3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPAP3Q9H6T3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.79■■□□□ 1.08
RPAP3Q9H6T3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.79■■□□□ 1.08
RPAP3Q9H6T3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
RPAP3Q9H6T3 RCC2P3-201ENST00000418112 1537 ntBASIC21.79■■□□□ 1.08
RPAP3Q9H6T3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RPAP3Q9H6T3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RPAP3Q9H6T3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms