Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 TNMD-201ENST00000373031 1339 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 PDPN-210ENST00000513143 1305 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 SERPINB3-202ENST00000332821 1541 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 PRC1-AS1-201ENST00000554388 1525 ntTSL 2 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 RNU4-76P-201ENST00000364509 141 ntBASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 MT-TR-201ENST00000387439 65 ntBASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 VN1R36P-201ENST00000414936 291 ntBASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 AL365226.2-201ENST00000418403 397 ntTSL 2 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 QRSL1P2-201ENST00000418582 964 ntBASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 CLIC4P3-201ENST00000422221 752 ntBASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 AL354692.1-201ENST00000423044 315 ntBASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 GRAMD4P2-201ENST00000423297 1097 ntBASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 AL353729.1-201ENST00000425044 720 ntBASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 AC016772.1-201ENST00000444170 1261 ntBASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 AC027612.2-202ENST00000445955 1199 ntBASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 MTND4P19-201ENST00000446659 478 ntBASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 NPM1P19-201ENST00000450070 712 ntBASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 AC092634.3-201ENST00000450544 637 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 AL354707.1-204ENST00000451142 846 ntTSL 2 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 AL162395.1-201ENST00000457882 422 ntBASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 RPL7P41-201ENST00000485823 957 ntBASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 OR2A7-201ENST00000493325 1116 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 AC008840.1-201ENST00000512486 809 ntTSL 5 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 OCIAD1-226ENST00000513391 1288 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 AC099730.1-201ENST00000525269 1177 ntBASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC4.02□□□□□ -1.77
KRTAP4-4Q9BYR3 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms