Protein–RNA interactions for Protein: Q9BR84

ZNF559, Zinc finger protein 559, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559Q9BR84 RN7SL850P-201ENST00000579959 291 ntBASIC17.58■□□□□ 0.4
ZNF559Q9BR84 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ZNF559Q9BR84 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
ZNF559Q9BR84 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF559Q9BR84 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF559Q9BR84 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF559Q9BR84 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.58■□□□□ 0.4
ZNF559Q9BR84 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
ZNF559Q9BR84 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.58■□□□□ 0.4
ZNF559Q9BR84 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF559Q9BR84 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF559Q9BR84 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 IRX1P1-201ENST00000438849 1838 ntBASIC17.57■□□□□ 0.4
ZNF559Q9BR84 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.57■□□□□ 0.4
ZNF559Q9BR84 AL353807.1-201ENST00000427475 662 ntBASIC17.57■□□□□ 0.4
ZNF559Q9BR84 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 C1QL1P1-201ENST00000568105 661 ntBASIC17.57■□□□□ 0.4
ZNF559Q9BR84 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF559Q9BR84 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF559Q9BR84 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF559Q9BR84 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.56■□□□□ 0.4
ZNF559Q9BR84 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNF559Q9BR84 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNF559Q9BR84 AC006333.2-201ENST00000607957 2099 ntBASIC17.56■□□□□ 0.4
ZNF559Q9BR84 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ZNF559Q9BR84 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
ZNF559Q9BR84 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF559Q9BR84 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF559Q9BR84 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF559Q9BR84 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
ZNF559Q9BR84 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.56■□□□□ 0.4
ZNF559Q9BR84 KRT18P35-201ENST00000510488 1269 ntBASIC17.56■□□□□ 0.4
ZNF559Q9BR84 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF559Q9BR84 AL049597.2-201ENST00000565575 961 ntBASIC17.56■□□□□ 0.4
ZNF559Q9BR84 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNF559Q9BR84 AL353708.3-201ENST00000610272 989 ntBASIC17.56■□□□□ 0.4
ZNF559Q9BR84 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF559Q9BR84 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF559Q9BR84 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.56■□□□□ 0.4
ZNF559Q9BR84 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNF559Q9BR84 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF559Q9BR84 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF559Q9BR84 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNF559Q9BR84 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF559Q9BR84 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
ZNF559Q9BR84 FEM1AP3-201ENST00000403722 1741 ntBASIC17.55■□□□□ 0.4
ZNF559Q9BR84 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.55■□□□□ 0.4
ZNF559Q9BR84 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
ZNF559Q9BR84 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ZNF559Q9BR84 HTR7P1-201ENST00000538670 1336 ntBASIC17.55■□□□□ 0.4
ZNF559Q9BR84 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF559Q9BR84 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF559Q9BR84 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
ZNF559Q9BR84 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.55■□□□□ 0.4
ZNF559Q9BR84 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
ZNF559Q9BR84 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.55■□□□□ 0.4
ZNF559Q9BR84 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.55■□□□□ 0.4
ZNF559Q9BR84 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNF559Q9BR84 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF559Q9BR84 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.55■□□□□ 0.4
ZNF559Q9BR84 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.55■□□□□ 0.4
ZNF559Q9BR84 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF559Q9BR84 AL160286.2-201ENST00000567150 934 ntBASIC17.55■□□□□ 0.4
ZNF559Q9BR84 AL590326.2-201ENST00000625139 305 ntBASIC17.55■□□□□ 0.4
ZNF559Q9BR84 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNF559Q9BR84 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF559Q9BR84 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms