Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 KRT8P9-201ENST00000558927 1449 ntBASIC15.78■□□□□ 0.12
GAFA1Q96PS6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 MMP23A-201ENST00000234610 1017 ntBASIC15.78■□□□□ 0.12
GAFA1Q96PS6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 BX088651.1-201ENST00000540551 451 ntBASIC15.78■□□□□ 0.12
GAFA1Q96PS6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
GAFA1Q96PS6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GAFA1Q96PS6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
GAFA1Q96PS6 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GAFA1Q96PS6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GAFA1Q96PS6 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GAFA1Q96PS6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GAFA1Q96PS6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
GAFA1Q96PS6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
GAFA1Q96PS6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GAFA1Q96PS6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.77■□□□□ 0.12
GAFA1Q96PS6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
GAFA1Q96PS6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.77■□□□□ 0.12
GAFA1Q96PS6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.77■□□□□ 0.12
GAFA1Q96PS6 CA15P1-201ENST00000481698 905 ntBASIC15.77■□□□□ 0.12
GAFA1Q96PS6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.77■□□□□ 0.12
GAFA1Q96PS6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.77■□□□□ 0.12
GAFA1Q96PS6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.77■□□□□ 0.12
GAFA1Q96PS6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
GAFA1Q96PS6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
GAFA1Q96PS6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
GAFA1Q96PS6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
GAFA1Q96PS6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
GAFA1Q96PS6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
GAFA1Q96PS6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.77■□□□□ 0.11
GAFA1Q96PS6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
GAFA1Q96PS6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GAFA1Q96PS6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GAFA1Q96PS6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GAFA1Q96PS6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
GAFA1Q96PS6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GAFA1Q96PS6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.76■□□□□ 0.11
GAFA1Q96PS6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
GAFA1Q96PS6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GAFA1Q96PS6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
GAFA1Q96PS6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.76■□□□□ 0.11
GAFA1Q96PS6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GAFA1Q96PS6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GAFA1Q96PS6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GAFA1Q96PS6 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.76■□□□□ 0.11
GAFA1Q96PS6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GAFA1Q96PS6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.76■□□□□ 0.11
GAFA1Q96PS6 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.76■□□□□ 0.11
GAFA1Q96PS6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.76■□□□□ 0.11
GAFA1Q96PS6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.76■□□□□ 0.11
GAFA1Q96PS6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
GAFA1Q96PS6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.76■□□□□ 0.11
GAFA1Q96PS6 C2orf69P3-201ENST00000565542 1120 ntBASIC15.76■□□□□ 0.11
GAFA1Q96PS6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GAFA1Q96PS6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.76■□□□□ 0.11
GAFA1Q96PS6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GAFA1Q96PS6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GAFA1Q96PS6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GAFA1Q96PS6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GAFA1Q96PS6 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.76■□□□□ 0.11
GAFA1Q96PS6 AC006333.2-201ENST00000607957 2099 ntBASIC15.75■□□□□ 0.11
GAFA1Q96PS6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GAFA1Q96PS6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.75■□□□□ 0.11
GAFA1Q96PS6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.75■□□□□ 0.11
GAFA1Q96PS6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GAFA1Q96PS6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
GAFA1Q96PS6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
GAFA1Q96PS6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
GAFA1Q96PS6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GAFA1Q96PS6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
GAFA1Q96PS6 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GAFA1Q96PS6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
GAFA1Q96PS6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
GAFA1Q96PS6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GAFA1Q96PS6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.75■□□□□ 0.11
GAFA1Q96PS6 AC098818.2-201ENST00000564925 2320 ntBASIC15.75■□□□□ 0.11
GAFA1Q96PS6 CYP2D8P-201ENST00000433633 1490 ntBASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms