Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.14■□□□□ 0.5
SLC46A1Q96NT5 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
SLC46A1Q96NT5 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SLC46A1Q96NT5 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SLC46A1Q96NT5 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
SLC46A1Q96NT5 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC46A1Q96NT5 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SLC46A1Q96NT5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC46A1Q96NT5 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC46A1Q96NT5 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC46A1Q96NT5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC46A1Q96NT5 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC46A1Q96NT5 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC46A1Q96NT5 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.14■□□□□ 0.49
SLC46A1Q96NT5 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.14■□□□□ 0.49
SLC46A1Q96NT5 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SLC46A1Q96NT5 NPAP1P7-201ENST00000613027 823 ntBASIC18.14■□□□□ 0.49
SLC46A1Q96NT5 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC46A1Q96NT5 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC46A1Q96NT5 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC46A1Q96NT5 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC46A1Q96NT5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC46A1Q96NT5 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC46A1Q96NT5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC46A1Q96NT5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SLC46A1Q96NT5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.14■□□□□ 0.49
SLC46A1Q96NT5 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC46A1Q96NT5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC46A1Q96NT5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
SLC46A1Q96NT5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC46A1Q96NT5 AC125437.2-201ENST00000625180 2167 ntBASIC18.13■□□□□ 0.49
SLC46A1Q96NT5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SLC46A1Q96NT5 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC46A1Q96NT5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC46A1Q96NT5 SPDYE15P-201ENST00000424157 909 ntBASIC18.13■□□□□ 0.49
SLC46A1Q96NT5 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC46A1Q96NT5 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC46A1Q96NT5 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC46A1Q96NT5 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.13■□□□□ 0.49
SLC46A1Q96NT5 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC46A1Q96NT5 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC46A1Q96NT5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC46A1Q96NT5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC46A1Q96NT5 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC46A1Q96NT5 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 SPDYE13P-201ENST00000445314 798 ntBASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC46A1Q96NT5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 HBZP1-201ENST00000354915 429 ntBASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 MIR3652-201ENST00000579335 131 ntBASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 AC092119.3-201ENST00000612618 583 ntBASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 TREX1-205ENST00000625293 1783 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms