Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.52■□□□□ 0.72
C9orf72Q96LT7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
C9orf72Q96LT7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
C9orf72Q96LT7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.52■□□□□ 0.72
C9orf72Q96LT7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.52■□□□□ 0.72
C9orf72Q96LT7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.52■□□□□ 0.72
C9orf72Q96LT7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.52■□□□□ 0.72
C9orf72Q96LT7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
C9orf72Q96LT7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 AP006587.1-201ENST00000534129 1502 ntBASIC19.51■□□□□ 0.71
C9orf72Q96LT7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 POM121L13P-201ENST00000422362 380 ntBASIC19.51■□□□□ 0.71
C9orf72Q96LT7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 AL359736.2-201ENST00000621992 437 ntBASIC19.51■□□□□ 0.71
C9orf72Q96LT7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.51■□□□□ 0.71
C9orf72Q96LT7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 RN7SL471P-201ENST00000580476 299 ntBASIC19.5■□□□□ 0.71
C9orf72Q96LT7 AC069544.1-201ENST00000609399 999 ntBASIC19.5■□□□□ 0.71
C9orf72Q96LT7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
C9orf72Q96LT7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 YBX1P10-201ENST00000444752 975 ntBASIC19.49■□□□□ 0.71
C9orf72Q96LT7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 AC233263.1-201ENST00000578059 224 ntBASIC19.49■□□□□ 0.71
C9orf72Q96LT7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms