Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ALPK3Q96L96 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ALPK3Q96L96 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ALPK3Q96L96 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ALPK3Q96L96 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ALPK3Q96L96 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ALPK3Q96L96 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ALPK3Q96L96 VENTXP7-201ENST00000475503 772 ntBASIC20.68■□□□□ 0.9
ALPK3Q96L96 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.68■□□□□ 0.9
ALPK3Q96L96 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALPK3Q96L96 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
ALPK3Q96L96 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALPK3Q96L96 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALPK3Q96L96 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALPK3Q96L96 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALPK3Q96L96 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALPK3Q96L96 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALPK3Q96L96 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.68■□□□□ 0.9
ALPK3Q96L96 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.68■□□□□ 0.9
ALPK3Q96L96 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.68■□□□□ 0.9
ALPK3Q96L96 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
ALPK3Q96L96 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.68■□□□□ 0.9
ALPK3Q96L96 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ALPK3Q96L96 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.68■□□□□ 0.9
ALPK3Q96L96 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALPK3Q96L96 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.68■□□□□ 0.9
ALPK3Q96L96 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.68■□□□□ 0.9
ALPK3Q96L96 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.67■□□□□ 0.9
ALPK3Q96L96 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ALPK3Q96L96 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.67■□□□□ 0.9
ALPK3Q96L96 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ALPK3Q96L96 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.67■□□□□ 0.9
ALPK3Q96L96 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.67■□□□□ 0.9
ALPK3Q96L96 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.67■□□□□ 0.9
ALPK3Q96L96 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ALPK3Q96L96 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.67■□□□□ 0.9
ALPK3Q96L96 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.67■□□□□ 0.9
ALPK3Q96L96 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ALPK3Q96L96 AP005212.1-201ENST00000581547 1997 ntBASIC20.67■□□□□ 0.9
ALPK3Q96L96 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.67■□□□□ 0.9
ALPK3Q96L96 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ALPK3Q96L96 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ALPK3Q96L96 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ALPK3Q96L96 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ALPK3Q96L96 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ALPK3Q96L96 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.66■□□□□ 0.9
ALPK3Q96L96 AP003733.1-201ENST00000491725 852 ntBASIC20.66■□□□□ 0.9
ALPK3Q96L96 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.66■□□□□ 0.9
ALPK3Q96L96 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ALPK3Q96L96 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.66■□□□□ 0.9
ALPK3Q96L96 AC010240.3-201ENST00000607688 395 ntBASIC20.66■□□□□ 0.9
ALPK3Q96L96 AC112497.1-201ENST00000624824 639 ntBASIC20.66■□□□□ 0.9
ALPK3Q96L96 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.66■□□□□ 0.9
ALPK3Q96L96 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ALPK3Q96L96 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ALPK3Q96L96 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ALPK3Q96L96 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ALPK3Q96L96 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ALPK3Q96L96 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ALPK3Q96L96 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.66■□□□□ 0.9
ALPK3Q96L96 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ALPK3Q96L96 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ALPK3Q96L96 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ALPK3Q96L96 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
ALPK3Q96L96 YBX2P1-201ENST00000394192 760 ntBASIC20.66■□□□□ 0.9
ALPK3Q96L96 RPS8P6-201ENST00000426177 609 ntBASIC20.66■□□□□ 0.9
ALPK3Q96L96 HNRNPDP1-201ENST00000439535 754 ntBASIC20.66■□□□□ 0.9
ALPK3Q96L96 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.66■□□□□ 0.9
ALPK3Q96L96 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.66■□□□□ 0.9
ALPK3Q96L96 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ALPK3Q96L96 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ALPK3Q96L96 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.66■□□□□ 0.9
ALPK3Q96L96 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.66■□□□□ 0.9
ALPK3Q96L96 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.66■□□□□ 0.9
ALPK3Q96L96 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ALPK3Q96L96 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ALPK3Q96L96 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
ALPK3Q96L96 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.65■□□□□ 0.9
ALPK3Q96L96 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ALPK3Q96L96 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ALPK3Q96L96 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ALPK3Q96L96 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.65■□□□□ 0.9
ALPK3Q96L96 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ALPK3Q96L96 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ALPK3Q96L96 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ALPK3Q96L96 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.65■□□□□ 0.9
ALPK3Q96L96 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ALPK3Q96L96 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ALPK3Q96L96 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ALPK3Q96L96 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.65■□□□□ 0.9
ALPK3Q96L96 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.65■□□□□ 0.9
ALPK3Q96L96 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ALPK3Q96L96 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ALPK3Q96L96 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.65■□□□□ 0.9
ALPK3Q96L96 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ALPK3Q96L96 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ALPK3Q96L96 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ALPK3Q96L96 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
ALPK3Q96L96 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.65■□□□□ 0.9
ALPK3Q96L96 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms