Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.47■□□□□ 0.87
SNX27Q96L92 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.47■□□□□ 0.87
SNX27Q96L92 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.47■□□□□ 0.87
SNX27Q96L92 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.47■□□□□ 0.87
SNX27Q96L92 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SNX27Q96L92 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.47■□□□□ 0.87
SNX27Q96L92 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.47■□□□□ 0.87
SNX27Q96L92 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SNX27Q96L92 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX27Q96L92 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.47■□□□□ 0.87
SNX27Q96L92 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SNX27Q96L92 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX27Q96L92 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SNX27Q96L92 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX27Q96L92 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SNX27Q96L92 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.46■□□□□ 0.87
SNX27Q96L92 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.46■□□□□ 0.87
SNX27Q96L92 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNX27Q96L92 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.46■□□□□ 0.87
SNX27Q96L92 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNX27Q96L92 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNX27Q96L92 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.46■□□□□ 0.87
SNX27Q96L92 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNX27Q96L92 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SNX27Q96L92 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNX27Q96L92 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.46■□□□□ 0.87
SNX27Q96L92 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNX27Q96L92 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
SNX27Q96L92 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SNX27Q96L92 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNX27Q96L92 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SNX27Q96L92 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SNX27Q96L92 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNX27Q96L92 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.46■□□□□ 0.87
SNX27Q96L92 AL023284.2-201ENST00000405850 579 ntBASIC20.46■□□□□ 0.87
SNX27Q96L92 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.46■□□□□ 0.87
SNX27Q96L92 YBX1P2-201ENST00000489612 999 ntBASIC20.46■□□□□ 0.87
SNX27Q96L92 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.46■□□□□ 0.87
SNX27Q96L92 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.46■□□□□ 0.87
SNX27Q96L92 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.46■□□□□ 0.87
SNX27Q96L92 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
SNX27Q96L92 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.46■□□□□ 0.87
SNX27Q96L92 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.46■□□□□ 0.87
SNX27Q96L92 CR769767.2-201ENST00000622735 460 ntBASIC20.46■□□□□ 0.87
SNX27Q96L92 AL358472.4-201ENST00000633140 710 ntBASIC20.46■□□□□ 0.87
SNX27Q96L92 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNX27Q96L92 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
SNX27Q96L92 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.46■□□□□ 0.87
SNX27Q96L92 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.46■□□□□ 0.87
SNX27Q96L92 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
SNX27Q96L92 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNX27Q96L92 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SNX27Q96L92 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNX27Q96L92 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SNX27Q96L92 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNX27Q96L92 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNX27Q96L92 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNX27Q96L92 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNX27Q96L92 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SNX27Q96L92 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SNX27Q96L92 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.45■□□□□ 0.86
SNX27Q96L92 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNX27Q96L92 AP000347.1-202ENST00000435868 847 ntBASIC20.45■□□□□ 0.86
SNX27Q96L92 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.45■□□□□ 0.86
SNX27Q96L92 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.45■□□□□ 0.86
SNX27Q96L92 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNX27Q96L92 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.45■□□□□ 0.86
SNX27Q96L92 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNX27Q96L92 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNX27Q96L92 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNX27Q96L92 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNX27Q96L92 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNX27Q96L92 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNX27Q96L92 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.45■□□□□ 0.86
SNX27Q96L92 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.45■□□□□ 0.86
SNX27Q96L92 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNX27Q96L92 FP475955.4-201ENST00000623131 1990 ntBASIC20.45■□□□□ 0.86
SNX27Q96L92 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.44■□□□□ 0.86
SNX27Q96L92 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNX27Q96L92 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SNX27Q96L92 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNX27Q96L92 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNX27Q96L92 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.44■□□□□ 0.86
SNX27Q96L92 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.44■□□□□ 0.86
SNX27Q96L92 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNX27Q96L92 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.44■□□□□ 0.86
SNX27Q96L92 AC009947.2-201ENST00000444014 672 ntBASIC20.44■□□□□ 0.86
SNX27Q96L92 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.44■□□□□ 0.86
SNX27Q96L92 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SNX27Q96L92 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SNX27Q96L92 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.44■□□□□ 0.86
SNX27Q96L92 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.44■□□□□ 0.86
SNX27Q96L92 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.44■□□□□ 0.86
SNX27Q96L92 WWOX-216ENST00000569818 525 ntBASIC20.44■□□□□ 0.86
SNX27Q96L92 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.44■□□□□ 0.86
SNX27Q96L92 AL023973.1-201ENST00000624619 620 ntBASIC20.44■□□□□ 0.86
SNX27Q96L92 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.44■□□□□ 0.86
SNX27Q96L92 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SNX27Q96L92 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNX27Q96L92 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms