Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 OR6D1P-202ENST00000641007 5290 ntBASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 LTB4R2-202ENST00000528054 3092 ntBASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 AC098934.4-201ENST00000564127 592 ntBASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXRED1Q96CU9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 MYC-209ENST00000641252 345 ntBASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 HTR7P1-202ENST00000624664 4411 ntBASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.48■□□□□ 0.23
FOXRED1Q96CU9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXRED1Q96CU9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXRED1Q96CU9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXRED1Q96CU9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXRED1Q96CU9 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.47■□□□□ 0.23
FOXRED1Q96CU9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
FOXRED1Q96CU9 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.47■□□□□ 0.23
FOXRED1Q96CU9 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
FOXRED1Q96CU9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXRED1Q96CU9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXRED1Q96CU9 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXRED1Q96CU9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXRED1Q96CU9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXRED1Q96CU9 TUBB8P6-201ENST00000436895 1288 ntBASIC16.47■□□□□ 0.23
FOXRED1Q96CU9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.47■□□□□ 0.23
FOXRED1Q96CU9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.47■□□□□ 0.23
FOXRED1Q96CU9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXRED1Q96CU9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.47■□□□□ 0.23
FOXRED1Q96CU9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.47■□□□□ 0.23
FOXRED1Q96CU9 AL354751.1-201ENST00000412768 1863 ntBASIC16.47■□□□□ 0.23
FOXRED1Q96CU9 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
FOXRED1Q96CU9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.47■□□□□ 0.23
FOXRED1Q96CU9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXRED1Q96CU9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms