Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
VPS33AQ96AX1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.22■□□□□ 0.51
VPS33AQ96AX1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 GUSBP6-202ENST00000438529 1198 ntBASIC18.22■□□□□ 0.51
VPS33AQ96AX1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 AL121832.2-201ENST00000610979 668 ntBASIC18.22■□□□□ 0.51
VPS33AQ96AX1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 ANO7L1-203ENST00000602586 1720 ntBASIC18.22■□□□□ 0.51
VPS33AQ96AX1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 AL354751.1-201ENST00000412768 1863 ntBASIC18.22■□□□□ 0.51
VPS33AQ96AX1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
VPS33AQ96AX1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS33AQ96AX1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
VPS33AQ96AX1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.21■□□□□ 0.51
VPS33AQ96AX1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS33AQ96AX1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
VPS33AQ96AX1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS33AQ96AX1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
VPS33AQ96AX1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS33AQ96AX1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
VPS33AQ96AX1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VPS33AQ96AX1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
VPS33AQ96AX1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS33AQ96AX1 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.21■□□□□ 0.51
VPS33AQ96AX1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.21■□□□□ 0.51
VPS33AQ96AX1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.21■□□□□ 0.51
VPS33AQ96AX1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.21■□□□□ 0.51
VPS33AQ96AX1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS33AQ96AX1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
VPS33AQ96AX1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS33AQ96AX1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS33AQ96AX1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
VPS33AQ96AX1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS33AQ96AX1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS33AQ96AX1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
VPS33AQ96AX1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS33AQ96AX1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
VPS33AQ96AX1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
VPS33AQ96AX1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 TUBB8P6-201ENST00000436895 1288 ntBASIC18.2■□□□□ 0.5
VPS33AQ96AX1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms