Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC22.32■■□□□ 1.16
BRF1Q92994 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
BRF1Q92994 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
BRF1Q92994 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
BRF1Q92994 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.32■■□□□ 1.16
BRF1Q92994 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
BRF1Q92994 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
BRF1Q92994 FAM207BP-201ENST00000447172 505 ntBASIC22.32■■□□□ 1.16
BRF1Q92994 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.32■■□□□ 1.16
BRF1Q92994 PENK-204ENST00000518770 863 ntTSL 2 BASIC22.32■■□□□ 1.16
BRF1Q92994 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC22.32■■□□□ 1.16
BRF1Q92994 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC22.32■■□□□ 1.16
BRF1Q92994 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC22.32■■□□□ 1.16
BRF1Q92994 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC22.32■■□□□ 1.16
BRF1Q92994 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC22.32■■□□□ 1.16
BRF1Q92994 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC22.32■■□□□ 1.16
BRF1Q92994 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
BRF1Q92994 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
BRF1Q92994 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
BRF1Q92994 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
BRF1Q92994 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
BRF1Q92994 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
BRF1Q92994 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC22.31■■□□□ 1.16
BRF1Q92994 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
BRF1Q92994 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC22.31■■□□□ 1.16
BRF1Q92994 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
BRF1Q92994 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
BRF1Q92994 FSCN1P1-201ENST00000568912 1481 ntBASIC22.31■■□□□ 1.16
BRF1Q92994 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC22.31■■□□□ 1.16
BRF1Q92994 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
BRF1Q92994 BAALC-201ENST00000297574 801 ntTSL 3 BASIC22.31■■□□□ 1.16
BRF1Q92994 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC22.31■■□□□ 1.16
BRF1Q92994 MDFI-202ENST00000373050 809 ntTSL 2 BASIC22.31■■□□□ 1.16
BRF1Q92994 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC22.31■■□□□ 1.16
BRF1Q92994 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC22.31■■□□□ 1.16
BRF1Q92994 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
BRF1Q92994 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC22.31■■□□□ 1.16
BRF1Q92994 NUDT16P1-203ENST00000513809 620 ntBASIC22.31■■□□□ 1.16
BRF1Q92994 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC22.31■■□□□ 1.16
BRF1Q92994 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC22.31■■□□□ 1.16
BRF1Q92994 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC22.31■■□□□ 1.16
BRF1Q92994 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.31■■□□□ 1.16
BRF1Q92994 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC22.31■■□□□ 1.16
BRF1Q92994 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
BRF1Q92994 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
BRF1Q92994 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC22.31■■□□□ 1.16
BRF1Q92994 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
BRF1Q92994 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
BRF1Q92994 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
BRF1Q92994 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
BRF1Q92994 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
BRF1Q92994 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
BRF1Q92994 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
BRF1Q92994 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
BRF1Q92994 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
BRF1Q92994 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
BRF1Q92994 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
BRF1Q92994 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
BRF1Q92994 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
BRF1Q92994 AC008550.1-201ENST00000511500 884 ntBASIC22.3■■□□□ 1.16
BRF1Q92994 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
BRF1Q92994 AL512353.2-201ENST00000448759 1962 ntBASIC22.3■■□□□ 1.16
BRF1Q92994 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC22.3■■□□□ 1.16
BRF1Q92994 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
BRF1Q92994 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
BRF1Q92994 AL031598.1-201ENST00000561511 1773 ntBASIC22.3■■□□□ 1.16
BRF1Q92994 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
BRF1Q92994 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BRF1Q92994 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BRF1Q92994 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
BRF1Q92994 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BRF1Q92994 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC22.29■■□□□ 1.16
BRF1Q92994 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BRF1Q92994 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
BRF1Q92994 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
BRF1Q92994 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
BRF1Q92994 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC22.29■■□□□ 1.16
BRF1Q92994 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
BRF1Q92994 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
BRF1Q92994 AC116562.2-201ENST00000507042 360 ntBASIC22.29■■□□□ 1.16
BRF1Q92994 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC22.29■■□□□ 1.16
BRF1Q92994 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC22.29■■□□□ 1.16
BRF1Q92994 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC22.29■■□□□ 1.16
BRF1Q92994 CKBP1-201ENST00000565489 1086 ntBASIC22.29■■□□□ 1.16
BRF1Q92994 AP001412.1-201ENST00000608405 714 ntBASIC22.29■■□□□ 1.16
BRF1Q92994 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.29■■□□□ 1.16
BRF1Q92994 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
BRF1Q92994 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BRF1Q92994 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC22.29■■□□□ 1.16
BRF1Q92994 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC22.29■■□□□ 1.16
BRF1Q92994 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC22.29■■□□□ 1.16
BRF1Q92994 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
BRF1Q92994 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC22.29■■□□□ 1.16
BRF1Q92994 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
BRF1Q92994 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
BRF1Q92994 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC22.29■■□□□ 1.16
BRF1Q92994 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC22.29■■□□□ 1.16
BRF1Q92994 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BRF1Q92994 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BRF1Q92994 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms