Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP6NLQ92738 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
USP6NLQ92738 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP6NLQ92738 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP6NLQ92738 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP6NLQ92738 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.47■■□□□ 1.03
USP6NLQ92738 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
USP6NLQ92738 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
USP6NLQ92738 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
USP6NLQ92738 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.46■■□□□ 1.03
USP6NLQ92738 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.46■■□□□ 1.03
USP6NLQ92738 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
USP6NLQ92738 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.46■■□□□ 1.03
USP6NLQ92738 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
USP6NLQ92738 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
USP6NLQ92738 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
USP6NLQ92738 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.46■■□□□ 1.03
USP6NLQ92738 MCCD1P1-208ENST00000445732 328 ntBASIC21.46■■□□□ 1.03
USP6NLQ92738 RNF126P1-202ENST00000569893 925 ntBASIC21.46■■□□□ 1.03
USP6NLQ92738 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.46■■□□□ 1.03
USP6NLQ92738 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
USP6NLQ92738 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
USP6NLQ92738 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
USP6NLQ92738 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
USP6NLQ92738 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
USP6NLQ92738 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
USP6NLQ92738 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.46■■□□□ 1.03
USP6NLQ92738 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.46■■□□□ 1.03
USP6NLQ92738 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
USP6NLQ92738 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP6NLQ92738 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
USP6NLQ92738 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
USP6NLQ92738 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP6NLQ92738 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP6NLQ92738 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
USP6NLQ92738 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.45■■□□□ 1.02
USP6NLQ92738 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.45■■□□□ 1.02
USP6NLQ92738 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
USP6NLQ92738 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.45■■□□□ 1.02
USP6NLQ92738 AC112497.1-201ENST00000624824 639 ntBASIC21.45■■□□□ 1.02
USP6NLQ92738 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
USP6NLQ92738 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP6NLQ92738 KRT18P1-202ENST00000452408 1331 ntBASIC21.45■■□□□ 1.02
USP6NLQ92738 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP6NLQ92738 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP6NLQ92738 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP6NLQ92738 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
USP6NLQ92738 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.45■■□□□ 1.02
USP6NLQ92738 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP6NLQ92738 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.45■■□□□ 1.02
USP6NLQ92738 KRT8P3-201ENST00000519669 1449 ntBASIC21.45■■□□□ 1.02
USP6NLQ92738 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.45■■□□□ 1.02
USP6NLQ92738 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
USP6NLQ92738 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
USP6NLQ92738 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
USP6NLQ92738 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
USP6NLQ92738 AL391422.3-201ENST00000603791 2761 ntBASIC21.44■■□□□ 1.02
USP6NLQ92738 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.44■■□□□ 1.02
USP6NLQ92738 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
USP6NLQ92738 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
USP6NLQ92738 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
USP6NLQ92738 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.44■■□□□ 1.02
USP6NLQ92738 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.44■■□□□ 1.02
USP6NLQ92738 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
USP6NLQ92738 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.44■■□□□ 1.02
USP6NLQ92738 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
USP6NLQ92738 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
USP6NLQ92738 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
USP6NLQ92738 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
USP6NLQ92738 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
USP6NLQ92738 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
USP6NLQ92738 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
USP6NLQ92738 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
USP6NLQ92738 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
USP6NLQ92738 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
USP6NLQ92738 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
USP6NLQ92738 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
USP6NLQ92738 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
USP6NLQ92738 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
USP6NLQ92738 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.43■■□□□ 1.02
USP6NLQ92738 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.43■■□□□ 1.02
USP6NLQ92738 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
USP6NLQ92738 AL160237.2-201ENST00000556165 472 ntBASIC21.43■■□□□ 1.02
USP6NLQ92738 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.43■■□□□ 1.02
USP6NLQ92738 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
USP6NLQ92738 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.43■■□□□ 1.02
USP6NLQ92738 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.43■■□□□ 1.02
USP6NLQ92738 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.43■■□□□ 1.02
USP6NLQ92738 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
USP6NLQ92738 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
USP6NLQ92738 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
USP6NLQ92738 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.43■■□□□ 1.02
USP6NLQ92738 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
USP6NLQ92738 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
USP6NLQ92738 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
USP6NLQ92738 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.42■■□□□ 1.02
USP6NLQ92738 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
USP6NLQ92738 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
USP6NLQ92738 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
USP6NLQ92738 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms