Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX1Q92499 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX1Q92499 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DDX1Q92499 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX1Q92499 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX1Q92499 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX1Q92499 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.22■□□□□ 0.83
DDX1Q92499 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX1Q92499 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DDX1Q92499 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX1Q92499 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
DDX1Q92499 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX1Q92499 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX1Q92499 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.21■□□□□ 0.83
DDX1Q92499 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.21■□□□□ 0.83
DDX1Q92499 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.21■□□□□ 0.83
DDX1Q92499 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.21■□□□□ 0.83
DDX1Q92499 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.21■□□□□ 0.83
DDX1Q92499 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.21■□□□□ 0.83
DDX1Q92499 AC005363.2-201ENST00000618631 242 ntBASIC20.21■□□□□ 0.83
DDX1Q92499 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX1Q92499 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DDX1Q92499 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.21■□□□□ 0.83
DDX1Q92499 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX1Q92499 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.21■□□□□ 0.83
DDX1Q92499 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX1Q92499 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
DDX1Q92499 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX1Q92499 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.21■□□□□ 0.83
DDX1Q92499 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
DDX1Q92499 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX1Q92499 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX1Q92499 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DDX1Q92499 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX1Q92499 FAM197Y1-201ENST00000421178 764 ntBASIC20.2■□□□□ 0.82
DDX1Q92499 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.2■□□□□ 0.82
DDX1Q92499 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX1Q92499 B3GAT3P1-201ENST00000471720 806 ntBASIC20.2■□□□□ 0.82
DDX1Q92499 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.2■□□□□ 0.82
DDX1Q92499 PRSS44-201ENST00000515154 1146 ntBASIC20.2■□□□□ 0.82
DDX1Q92499 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX1Q92499 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.2■□□□□ 0.82
DDX1Q92499 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.2■□□□□ 0.82
DDX1Q92499 AC011298.2-201ENST00000617989 482 ntBASIC20.2■□□□□ 0.82
DDX1Q92499 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX1Q92499 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
DDX1Q92499 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX1Q92499 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.2■□□□□ 0.82
DDX1Q92499 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
DDX1Q92499 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DDX1Q92499 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
DDX1Q92499 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
DDX1Q92499 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX1Q92499 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX1Q92499 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX1Q92499 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
DDX1Q92499 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX1Q92499 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.19■□□□□ 0.82
DDX1Q92499 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.19■□□□□ 0.82
DDX1Q92499 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DDX1Q92499 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.19■□□□□ 0.82
DDX1Q92499 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.19■□□□□ 0.82
DDX1Q92499 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DDX1Q92499 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.19■□□□□ 0.82
DDX1Q92499 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.19■□□□□ 0.82
DDX1Q92499 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.19■□□□□ 0.82
DDX1Q92499 MIR6786-201ENST00000616843 113 ntBASIC20.19■□□□□ 0.82
DDX1Q92499 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
DDX1Q92499 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.19■□□□□ 0.82
DDX1Q92499 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX1Q92499 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX1Q92499 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DDX1Q92499 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
DDX1Q92499 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.19■□□□□ 0.82
DDX1Q92499 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX1Q92499 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.18■□□□□ 0.82
DDX1Q92499 Z98044.1-201ENST00000632503 1764 ntBASIC20.18■□□□□ 0.82
DDX1Q92499 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX1Q92499 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX1Q92499 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
DDX1Q92499 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX1Q92499 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX1Q92499 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX1Q92499 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
DDX1Q92499 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX1Q92499 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
DDX1Q92499 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.18■□□□□ 0.82
DDX1Q92499 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.18■□□□□ 0.82
DDX1Q92499 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.18■□□□□ 0.82
DDX1Q92499 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.18■□□□□ 0.82
DDX1Q92499 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
DDX1Q92499 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.18■□□□□ 0.82
DDX1Q92499 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DDX1Q92499 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.18■□□□□ 0.82
DDX1Q92499 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
DDX1Q92499 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX1Q92499 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX1Q92499 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
DDX1Q92499 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DDX1Q92499 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms