Protein–RNA interactions for Protein: Q8TBB1

LNX1, E3 ubiquitin-protein ligase LNX, humanhuman

Predicted RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNX1Q8TBB1 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.66■□□□□ 0.9
LNX1Q8TBB1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
LNX1Q8TBB1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.66■□□□□ 0.9
LNX1Q8TBB1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.66■□□□□ 0.9
LNX1Q8TBB1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LNX1Q8TBB1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.66■□□□□ 0.9
LNX1Q8TBB1 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.66■□□□□ 0.9
LNX1Q8TBB1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
LNX1Q8TBB1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LNX1Q8TBB1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.66■□□□□ 0.9
LNX1Q8TBB1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LNX1Q8TBB1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.65■□□□□ 0.9
LNX1Q8TBB1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
LNX1Q8TBB1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LNX1Q8TBB1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.65■□□□□ 0.9
LNX1Q8TBB1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LNX1Q8TBB1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
LNX1Q8TBB1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
LNX1Q8TBB1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LNX1Q8TBB1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LNX1Q8TBB1 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LNX1Q8TBB1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LNX1Q8TBB1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.65■□□□□ 0.9
LNX1Q8TBB1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LNX1Q8TBB1 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LNX1Q8TBB1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.65■□□□□ 0.9
LNX1Q8TBB1 AL160286.2-201ENST00000567150 934 ntBASIC20.65■□□□□ 0.9
LNX1Q8TBB1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LNX1Q8TBB1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LNX1Q8TBB1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LNX1Q8TBB1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LNX1Q8TBB1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
LNX1Q8TBB1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LNX1Q8TBB1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.64■□□□□ 0.9
LNX1Q8TBB1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LNX1Q8TBB1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
LNX1Q8TBB1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LNX1Q8TBB1 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.64■□□□□ 0.89
LNX1Q8TBB1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
LNX1Q8TBB1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LNX1Q8TBB1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.64■□□□□ 0.89
LNX1Q8TBB1 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.64■□□□□ 0.89
LNX1Q8TBB1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LNX1Q8TBB1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.64■□□□□ 0.89
LNX1Q8TBB1 LIN28AP1-201ENST00000429574 405 ntBASIC20.64■□□□□ 0.89
LNX1Q8TBB1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
LNX1Q8TBB1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.64■□□□□ 0.89
LNX1Q8TBB1 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LNX1Q8TBB1 DUX4L26-201ENST00000489078 1255 ntBASIC20.64■□□□□ 0.89
LNX1Q8TBB1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LNX1Q8TBB1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
LNX1Q8TBB1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
LNX1Q8TBB1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
LNX1Q8TBB1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LNX1Q8TBB1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.63■□□□□ 0.89
LNX1Q8TBB1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LNX1Q8TBB1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.63■□□□□ 0.89
LNX1Q8TBB1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.63■□□□□ 0.89
LNX1Q8TBB1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
LNX1Q8TBB1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LNX1Q8TBB1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LNX1Q8TBB1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LNX1Q8TBB1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LNX1Q8TBB1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LNX1Q8TBB1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LNX1Q8TBB1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LNX1Q8TBB1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.63■□□□□ 0.89
LNX1Q8TBB1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.63■□□□□ 0.89
LNX1Q8TBB1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.63■□□□□ 0.89
LNX1Q8TBB1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.63■□□□□ 0.89
LNX1Q8TBB1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.63■□□□□ 0.89
LNX1Q8TBB1 AC006011.2-201ENST00000621313 1158 ntBASIC20.63■□□□□ 0.89
LNX1Q8TBB1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LNX1Q8TBB1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LNX1Q8TBB1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.63■□□□□ 0.89
LNX1Q8TBB1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LNX1Q8TBB1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.63■□□□□ 0.89
LNX1Q8TBB1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LNX1Q8TBB1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LNX1Q8TBB1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LNX1Q8TBB1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LNX1Q8TBB1 CROCCP3-202ENST00000420820 1947 ntBASIC20.63■□□□□ 0.89
LNX1Q8TBB1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LNX1Q8TBB1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
LNX1Q8TBB1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LNX1Q8TBB1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LNX1Q8TBB1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LNX1Q8TBB1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LNX1Q8TBB1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
LNX1Q8TBB1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
LNX1Q8TBB1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LNX1Q8TBB1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LNX1Q8TBB1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.62■□□□□ 0.89
LNX1Q8TBB1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LNX1Q8TBB1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LNX1Q8TBB1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.62■□□□□ 0.89
LNX1Q8TBB1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LNX1Q8TBB1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LNX1Q8TBB1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.62■□□□□ 0.89
LNX1Q8TBB1 ATP5G1P1-201ENST00000448724 379 ntBASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms