Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 TSPY7P-201ENST00000431358 1114 ntBASIC20.34■□□□□ 0.85
LMO3Q8TAP4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.34■□□□□ 0.85
LMO3Q8TAP4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.34■□□□□ 0.85
LMO3Q8TAP4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.34■□□□□ 0.85
LMO3Q8TAP4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.34■□□□□ 0.85
LMO3Q8TAP4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.34■□□□□ 0.85
LMO3Q8TAP4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
LMO3Q8TAP4 AC008622.2-201ENST00000617006 1229 ntBASIC20.34■□□□□ 0.85
LMO3Q8TAP4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
LMO3Q8TAP4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LMO3Q8TAP4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.34■□□□□ 0.85
LMO3Q8TAP4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LMO3Q8TAP4 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.34■□□□□ 0.85
LMO3Q8TAP4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LMO3Q8TAP4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LMO3Q8TAP4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LMO3Q8TAP4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LMO3Q8TAP4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
LMO3Q8TAP4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LMO3Q8TAP4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
LMO3Q8TAP4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.33■□□□□ 0.85
LMO3Q8TAP4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LMO3Q8TAP4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LMO3Q8TAP4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
LMO3Q8TAP4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LMO3Q8TAP4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LMO3Q8TAP4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
LMO3Q8TAP4 AL355355.2-201ENST00000442321 338 ntBASIC20.33■□□□□ 0.85
LMO3Q8TAP4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.33■□□□□ 0.85
LMO3Q8TAP4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.33■□□□□ 0.85
LMO3Q8TAP4 AP003071.4-201ENST00000562276 1284 ntBASIC20.33■□□□□ 0.85
LMO3Q8TAP4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.33■□□□□ 0.85
LMO3Q8TAP4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LMO3Q8TAP4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.33■□□□□ 0.84
LMO3Q8TAP4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LMO3Q8TAP4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
LMO3Q8TAP4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LMO3Q8TAP4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LMO3Q8TAP4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
LMO3Q8TAP4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.84
LMO3Q8TAP4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
LMO3Q8TAP4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.33■□□□□ 0.84
LMO3Q8TAP4 WIZP1-201ENST00000531444 2299 ntBASIC20.33■□□□□ 0.84
LMO3Q8TAP4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LMO3Q8TAP4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LMO3Q8TAP4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.33■□□□□ 0.84
LMO3Q8TAP4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LMO3Q8TAP4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LMO3Q8TAP4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.32■□□□□ 0.84
LMO3Q8TAP4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LMO3Q8TAP4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LMO3Q8TAP4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.32■□□□□ 0.84
LMO3Q8TAP4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LMO3Q8TAP4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LMO3Q8TAP4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LMO3Q8TAP4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
LMO3Q8TAP4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.32■□□□□ 0.84
LMO3Q8TAP4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LMO3Q8TAP4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LMO3Q8TAP4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.32■□□□□ 0.84
LMO3Q8TAP4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LMO3Q8TAP4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LMO3Q8TAP4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.32■□□□□ 0.84
LMO3Q8TAP4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LMO3Q8TAP4 MFAP1P1-201ENST00000442257 1255 ntBASIC20.32■□□□□ 0.84
LMO3Q8TAP4 AC097488.1-201ENST00000507834 756 ntBASIC20.32■□□□□ 0.84
LMO3Q8TAP4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.32■□□□□ 0.84
LMO3Q8TAP4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.32■□□□□ 0.84
LMO3Q8TAP4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.32■□□□□ 0.84
LMO3Q8TAP4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.32■□□□□ 0.84
LMO3Q8TAP4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LMO3Q8TAP4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.32■□□□□ 0.84
LMO3Q8TAP4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LMO3Q8TAP4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LMO3Q8TAP4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.32■□□□□ 0.84
LMO3Q8TAP4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.32■□□□□ 0.84
LMO3Q8TAP4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LMO3Q8TAP4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.31■□□□□ 0.84
LMO3Q8TAP4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.31■□□□□ 0.84
LMO3Q8TAP4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LMO3Q8TAP4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.31■□□□□ 0.84
LMO3Q8TAP4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LMO3Q8TAP4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
LMO3Q8TAP4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.31■□□□□ 0.84
LMO3Q8TAP4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LMO3Q8TAP4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LMO3Q8TAP4 RNF165-205ENST00000588679 2904 ntBASIC20.31■□□□□ 0.84
LMO3Q8TAP4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.31■□□□□ 0.84
LMO3Q8TAP4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.31■□□□□ 0.84
LMO3Q8TAP4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LMO3Q8TAP4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
LMO3Q8TAP4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LMO3Q8TAP4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.31■□□□□ 0.84
LMO3Q8TAP4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LMO3Q8TAP4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.31■□□□□ 0.84
LMO3Q8TAP4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.31■□□□□ 0.84
LMO3Q8TAP4 SLC25A1P4-201ENST00000567977 778 ntBASIC20.31■□□□□ 0.84
LMO3Q8TAP4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LMO3Q8TAP4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LMO3Q8TAP4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms