Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
BEST2Q8NFU1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
BEST2Q8NFU1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.39■□□□□ 0.86
BEST2Q8NFU1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.39■□□□□ 0.86
BEST2Q8NFU1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.39■□□□□ 0.86
BEST2Q8NFU1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.39■□□□□ 0.86
BEST2Q8NFU1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
BEST2Q8NFU1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BEST2Q8NFU1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
BEST2Q8NFU1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BEST2Q8NFU1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BEST2Q8NFU1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BEST2Q8NFU1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.39■□□□□ 0.85
BEST2Q8NFU1 BX664615.1-201ENST00000443558 458 ntBASIC20.39■□□□□ 0.85
BEST2Q8NFU1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.39■□□□□ 0.85
BEST2Q8NFU1 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.39■□□□□ 0.85
BEST2Q8NFU1 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.39■□□□□ 0.85
BEST2Q8NFU1 AC006011.2-201ENST00000621313 1158 ntBASIC20.39■□□□□ 0.85
BEST2Q8NFU1 AL138966.2-201ENST00000621997 464 ntBASIC20.39■□□□□ 0.85
BEST2Q8NFU1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
BEST2Q8NFU1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.39■□□□□ 0.85
BEST2Q8NFU1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BEST2Q8NFU1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
BEST2Q8NFU1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
BEST2Q8NFU1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BEST2Q8NFU1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
BEST2Q8NFU1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BEST2Q8NFU1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BEST2Q8NFU1 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BEST2Q8NFU1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.38■□□□□ 0.85
BEST2Q8NFU1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BEST2Q8NFU1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
BEST2Q8NFU1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BEST2Q8NFU1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.38■□□□□ 0.85
BEST2Q8NFU1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BEST2Q8NFU1 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.38■□□□□ 0.85
BEST2Q8NFU1 KRT8P45-201ENST00000414328 1447 ntBASIC20.38■□□□□ 0.85
BEST2Q8NFU1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
BEST2Q8NFU1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.38■□□□□ 0.85
BEST2Q8NFU1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
BEST2Q8NFU1 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BEST2Q8NFU1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
BEST2Q8NFU1 DUX4L26-201ENST00000489078 1255 ntBASIC20.38■□□□□ 0.85
BEST2Q8NFU1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
BEST2Q8NFU1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.38■□□□□ 0.85
BEST2Q8NFU1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.38■□□□□ 0.85
BEST2Q8NFU1 MIR4674-201ENST00000582457 87 ntBASIC20.38■□□□□ 0.85
BEST2Q8NFU1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
BEST2Q8NFU1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BEST2Q8NFU1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
BEST2Q8NFU1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
BEST2Q8NFU1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.37■□□□□ 0.85
BEST2Q8NFU1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
BEST2Q8NFU1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
BEST2Q8NFU1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BEST2Q8NFU1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BEST2Q8NFU1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BEST2Q8NFU1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.37■□□□□ 0.85
BEST2Q8NFU1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
BEST2Q8NFU1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BEST2Q8NFU1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BEST2Q8NFU1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BEST2Q8NFU1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
BEST2Q8NFU1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BEST2Q8NFU1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.37■□□□□ 0.85
BEST2Q8NFU1 AC141257.4-201ENST00000634557 245 ntBASIC20.37■□□□□ 0.85
BEST2Q8NFU1 AC136944.6-201ENST00000634818 245 ntBASIC20.37■□□□□ 0.85
BEST2Q8NFU1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BEST2Q8NFU1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
BEST2Q8NFU1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BEST2Q8NFU1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BEST2Q8NFU1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BEST2Q8NFU1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
BEST2Q8NFU1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms