Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCDC168Q8NDH2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 SCARNA2-201ENST00000458748 420 ntBASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 AL356488.2-201ENST00000602755 427 ntBASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 AL390719.2-201ENST00000606993 987 ntBASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 AC211486.1-202ENST00000416371 468 ntBASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 UPF3AP3-201ENST00000420996 769 ntBASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 RPS8P6-201ENST00000426177 609 ntBASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 VENTXP7-201ENST00000475503 772 ntBASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 AC211476.1-201ENST00000503899 468 ntBASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 BNIP3P18-201ENST00000593976 575 ntBASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 MIR7706-201ENST00000613747 67 ntBASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.83■□□□□ 0.12
CCDC168Q8NDH2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 GPX1P2-201ENST00000429271 606 ntBASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CCDC168Q8NDH2 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC168Q8NDH2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC168Q8NDH2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CCDC168Q8NDH2 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC168Q8NDH2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC168Q8NDH2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC168Q8NDH2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC168Q8NDH2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC168Q8NDH2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC168Q8NDH2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
CCDC168Q8NDH2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC168Q8NDH2 HNRNPDP1-201ENST00000439535 754 ntBASIC15.81■□□□□ 0.12
CCDC168Q8NDH2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC168Q8NDH2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC168Q8NDH2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC168Q8NDH2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC168Q8NDH2 AC005332.3-201ENST00000589904 676 ntBASIC15.81■□□□□ 0.12
CCDC168Q8NDH2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC168Q8NDH2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC168Q8NDH2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC168Q8NDH2 FEM1AP4-201ENST00000443167 1987 ntBASIC15.81■□□□□ 0.12
CCDC168Q8NDH2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCDC168Q8NDH2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC168Q8NDH2 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC168Q8NDH2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC168Q8NDH2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC168Q8NDH2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 YBX2P1-201ENST00000394192 760 ntBASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 MED15P5-201ENST00000423150 992 ntBASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms