Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.1■□□□□ 0.81
TMEM35BQ8NCS4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.1■□□□□ 0.81
TMEM35BQ8NCS4 CROCCP3-202ENST00000420820 1947 ntBASIC20.1■□□□□ 0.81
TMEM35BQ8NCS4 RNF165-205ENST00000588679 2904 ntBASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 AL355355.2-201ENST00000442321 338 ntBASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 DGCR10-201ENST00000609839 495 ntBASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM35BQ8NCS4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
TMEM35BQ8NCS4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM35BQ8NCS4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.08■□□□□ 0.81
TMEM35BQ8NCS4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM35BQ8NCS4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM35BQ8NCS4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM35BQ8NCS4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.08■□□□□ 0.81
TMEM35BQ8NCS4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.08■□□□□ 0.81
TMEM35BQ8NCS4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM35BQ8NCS4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM35BQ8NCS4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM35BQ8NCS4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
TMEM35BQ8NCS4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM35BQ8NCS4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.08■□□□□ 0.81
TMEM35BQ8NCS4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM35BQ8NCS4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.08■□□□□ 0.81
TMEM35BQ8NCS4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.08■□□□□ 0.81
TMEM35BQ8NCS4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.08■□□□□ 0.81
TMEM35BQ8NCS4 AC083906.6-201ENST00000641366 219 ntBASIC20.08■□□□□ 0.81
TMEM35BQ8NCS4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TMEM35BQ8NCS4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TMEM35BQ8NCS4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
TMEM35BQ8NCS4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
TMEM35BQ8NCS4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.08■□□□□ 0.8
TMEM35BQ8NCS4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
TMEM35BQ8NCS4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TMEM35BQ8NCS4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.08■□□□□ 0.8
TMEM35BQ8NCS4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.08■□□□□ 0.8
TMEM35BQ8NCS4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
TMEM35BQ8NCS4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 AC026471.5-201ENST00000615068 467 ntBASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.07■□□□□ 0.8
TMEM35BQ8NCS4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM35BQ8NCS4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.06■□□□□ 0.8
TMEM35BQ8NCS4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TMEM35BQ8NCS4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM35BQ8NCS4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM35BQ8NCS4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM35BQ8NCS4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM35BQ8NCS4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms