Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LSMEM1Q8N8F7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
LSMEM1Q8N8F7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LSMEM1Q8N8F7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 AC004980.1-204ENST00000429707 299 ntBASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 KSR1P1-201ENST00000446298 240 ntBASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 C1QBPP2-201ENST00000528754 825 ntBASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 HTR7P1-201ENST00000538670 1336 ntBASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.36■□□□□ 0.37
LSMEM1Q8N8F7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 AL512353.2-201ENST00000448759 1962 ntBASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 AL139384.1-201ENST00000612143 3047 ntBASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 RPPH1-201ENST00000516869 333 ntBASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LSMEM1Q8N8F7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
LSMEM1Q8N8F7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSMEM1Q8N8F7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSMEM1Q8N8F7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSMEM1Q8N8F7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSMEM1Q8N8F7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSMEM1Q8N8F7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSMEM1Q8N8F7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LSMEM1Q8N8F7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
LSMEM1Q8N8F7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.34■□□□□ 0.37
LSMEM1Q8N8F7 AP002982.1-201ENST00000492365 877 ntBASIC17.34■□□□□ 0.37
LSMEM1Q8N8F7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LSMEM1Q8N8F7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
LSMEM1Q8N8F7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.34■□□□□ 0.37
LSMEM1Q8N8F7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.34■□□□□ 0.37
LSMEM1Q8N8F7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.34■□□□□ 0.37
LSMEM1Q8N8F7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.34■□□□□ 0.37
LSMEM1Q8N8F7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSMEM1Q8N8F7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LSMEM1Q8N8F7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.34■□□□□ 0.37
LSMEM1Q8N8F7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSMEM1Q8N8F7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSMEM1Q8N8F7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.34■□□□□ 0.37
LSMEM1Q8N8F7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSMEM1Q8N8F7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSMEM1Q8N8F7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSMEM1Q8N8F7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSMEM1Q8N8F7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSMEM1Q8N8F7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms