Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AC060766.5-201ENST00000590539 871 ntBASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 NOC2LP2-201ENST00000407594 1944 ntBASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LINC01561Q8N1V8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 AC092368.3-202ENST00000574180 1591 ntBASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 AC026271.2-201ENST00000428091 497 ntBASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 AC026185.1-201ENST00000445748 174 ntBASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 AC080038.1-201ENST00000611274 1154 ntBASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01561Q8N1V8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 AP000997.3-201ENST00000623333 2250 ntBASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 AL160286.2-201ENST00000567150 934 ntBASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 AL121832.2-201ENST00000610979 668 ntBASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 MIR5787-201ENST00000611784 55 ntBASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 AL050303.2-201ENST00000619798 666 ntBASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 AC073111.5-205ENST00000641717 521 ntBASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC01561Q8N1V8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms